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cn_combo_scaffold_233

Alias: GEM22_5

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Displaying items 1-30 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_233_1
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

108..650
DNA (543bp) protein (181aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
cn_combo_scaffold_233_2
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

1966..3294
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Desulfovibrio africanus PCS RepID=M5PQ44_DESAF
glucosyltransferase-I precursor Tax=RBG_13_Chloroflexi_54_8_curated
glucosyltransferase-I precursor
cn_combo_scaffold_233_3
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

Not on your lists

3814..5358
DNA (1545bp) protein (515aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G4X0_CHLAD
regulator of chromosome condensation RCC1 Tax=GWF2_Melainabacteria_32_7_curated
protein kinase
cn_combo_scaffold_233_4
unknown

Not on your lists

5558..5785
DNA (228bp) protein (76aa)

This feature has no annotations

cn_combo_scaffold_233_5
unknown

Not on your lists

comp(5878..6489)
DNA (612bp) protein (204aa)

This feature has no annotations

cn_combo_scaffold_233_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

6761..7198
DNA (438bp) protein (146aa)
Transcriptional regulator {ECO:0000313|EMBL:CDM66761.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
transcriptional regulator id=7719037 bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
MarR family transcriptional regulator
cn_combo_scaffold_233_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

7288..8151
DNA (864bp) protein (288aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028X8_SOLUE
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABJ82424.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soliba
cn_combo_scaffold_233_8
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8277..8501)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B52015
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
hypothetical protein
cn_combo_scaffold_233_9
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8550..9047)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2LH61_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC03991.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticarie
h16_A0053; hypothetical protein
cn_combo_scaffold_233_10
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9128..9535
DNA (408bp) protein (136aa)
MerR family transcriptional regulator n=1 Tax=Burkholderia pseudomallei RepID=UPI00016A9938
merR regulatory family protein
MerR regulatory family protein {ECO:0000313|EMBL:AIO87460.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;"
cn_combo_scaffold_233_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9594..10076)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI0003760CE0
zinc-binding CMP/dCMP deaminase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
bifunctional haloalkane dehalogenase/tRNA-specific adenosine deaminase
cn_combo_scaffold_233_12
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10081..12774)
DNA (2694bp) protein (898aa)
TonB-dependent receptor plug n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EAG0_RUNSL
TonB-dependent receptor plug {ECO:0000313|EMBL:AEI48064.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithy
TonB-dependent receptor plug
cn_combo_scaffold_233_13
unknown

Not on your lists

12793..14013
DNA (1221bp) protein (407aa)

This feature has no annotations

cn_combo_scaffold_233_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(13985..15502)
DNA (1518bp) protein (506aa)
Peptidase S10 serine carboxypeptidase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BAK1_MEISD
peptidase S10 serine carboxypeptidase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
peptidase S10 serine carboxypeptidase
cn_combo_scaffold_233_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15971..17164
DNA (1194bp) protein (398aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:BAH40006.1}; EC=6.1.1.2 {ECO:0000313|EMBL:BAH40006.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimon
Tryptophanyl-tRNA synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABX9_GEMAT
cn_combo_scaffold_233_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

17274..19040
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI000363D56C
secreted protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
secreted protein
cn_combo_scaffold_233_17
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(19114..19431)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00036258E1
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67279.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
cn_combo_scaffold_233_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19489..20322)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000371A2DA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93382.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_233_19
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20541..21509
DNA (969bp) protein (323aa)
Transcriptional regulator, AraC family n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IK53_ANADE
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABC82037.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaero
cn_combo_scaffold_233_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21568..23622)
DNA (2055bp) protein (685aa)
Pyrrolo-quinoline quinone n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029Y3_SOLUE
Pyrrolo-quinoline quinone beta-propeller repeat-containing protein
Pyrrolo-quinoline quinone beta-propeller repeat-containing protein {ECO:0000313|EMBL:AHG89770.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_233_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23769..26429)
DNA (2661bp) protein (887aa)
Efflux ABC transporter, permease protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F743_ACIC5
permease
Permease {ECO:0000313|EMBL:AHG92745.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_233_22
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(26429..26746)
DNA (318bp) protein (106aa)
Transcriptional regulator, PadR family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W25_SOLUE
PadR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
transcriptional regulator PadR family protein
cn_combo_scaffold_233_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26967..28019)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7G4_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90645.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_233_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

28158..28868
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3L2_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37089.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_233_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

29010..29438
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PFV3_9CAUL
TPR repeat-containing protein
TPR repeat-containing protein {ECO:0000313|EMBL:AHG89232.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_233_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

29484..30590
DNA (1107bp) protein (369aa)
Tetratricopeptide n=1 Tax=uncultured Acidobacteria bacterium A12 RepID=F8TTL3_9BACT
TPR repeat-containing protein
TPR repeat-containing protein {ECO:0000313|EMBL:AHG89232.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_233_27
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(30716..31360)
DNA (645bp) protein (215aa)
Hypothethical protein n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NDD5_RALSL
Uncharacterized protein {ECO:0000313|EMBL:KGA93420.1}; TaxID=178606 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum.;"
hypothetical protein
cn_combo_scaffold_233_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(31582..34026)
DNA (2445bp) protein (815aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027A7_SOLUE
Permease {ECO:0000313|EMBL:AHG88232.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
permease rbh
cn_combo_scaffold_233_29
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34160..36139)
DNA (1980bp) protein (660aa)
multi-sensor hybrid histidine kinase Tax=RBG_16_Deltaproteobacteria_48_10_curated
Multi-sensor hybrid histidine kinase id=4909725 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
PAS/PAC sensor hybrid histidine kinase
cn_combo_scaffold_233_30
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36136..36576)
DNA (441bp) protein (147aa)
Response regulator, receiver n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FFU7_STIAD
response regulator, receiver
Response regulator, receiver {ECO:0000313|EMBL:ADO75206.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source
Displaying items 1-30 of 114 in total

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