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cn_combo_scaffold_917

Alias: GEM22_23

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_917_1
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

134..1498
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KA34_AZOSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL95690.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).
cn_combo_scaffold_917_2
unknown

Not on your lists

comp(2895..3506)
DNA (612bp) protein (204aa)

This feature has no annotations

cn_combo_scaffold_917_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3766..4662
DNA (897bp) protein (299aa)
DoxX n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJQ6_KORVE
DoxX protein
DoxX {ECO:0000313|EMBL:ABF42894.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
cn_combo_scaffold_917_4
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5131..5823
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0SK83_RHOSR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG92053.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
cn_combo_scaffold_917_5
unknown

Not on your lists

comp(5655..6563)
DNA (909bp) protein (303aa)

This feature has no annotations

cn_combo_scaffold_917_6
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6587..7225
DNA (639bp) protein (213aa)
deaminase n=1 Tax=Thiobacillus thioparus RepID=UPI00037EDE2F
bifunctional deaminase-reductase domain-containing protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
deaminase-reductase domain-containing protein
cn_combo_scaffold_917_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7364..8404
DNA (1041bp) protein (347aa)
Putative esterase n=2 Tax=Salinibacter ruber RepID=D5HAT8_SALRM
esterase superfamily protein
Putative esterase {ECO:0000313|EMBL:CBH25143.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
cn_combo_scaffold_917_8
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8532..8927
DNA (396bp) protein (132aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3AFC
Predicted 3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:GAK44171.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
3-demethylubiquinone-9 3-methyltransferase
cn_combo_scaffold_917_9
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9030..9374
DNA (345bp) protein (115aa)
cupin n=1 Tax=Thiobacillus thioparus RepID=UPI0003630BEF
Cupin domain protein {ECO:0000313|EMBL:GAM10196.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
hypothetical protein
cn_combo_scaffold_917_10
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9375..9899
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADW5_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40692.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_917_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9844..11304)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T8_GEMAT
Ig domain protein group 2 domain protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:AHG91641.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_917_12
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11583..12701
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037C7607
pyruvate formate lyase-activating enzyme
Tax=BJP_IG2102_Gammaproteobacteria_62_140
cn_combo_scaffold_917_13
unknown

Not on your lists

13101..13502
DNA (402bp) protein (134aa)

This feature has no annotations

cn_combo_scaffold_917_14

Not on your lists

13586..15088
DNA (1503bp) protein (501aa)
bte:BTH_II1778 cytochrome c id=717638 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Putative outer membrane cytochrome c {ECO:0000313|EMBL:CBI07521.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative cytochrome c1 signal peptide protein
cn_combo_scaffold_917_15
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15192..15743)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PLY3_MURRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM72252.1}; Flags: Precursor;; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muric
cn_combo_scaffold_917_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16213..18354
DNA (2142bp) protein (714aa)
CoA-binding domain protein n=1 Tax=Bacillus tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WXF1_BACT2 id=5223885 bin=16ft_combo_ws3_JS1 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
CoA-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
CoA-binding protein
cn_combo_scaffold_917_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18445..19029
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADJ6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40573.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_917_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19017..19802
DNA (786bp) protein (262aa)
1,4-dihydroxy-6-naphtoate synthase {ECO:0000256|HAMAP-Rule:MF_00996}; EC=4.1.-.- {ECO:0000256|HAMAP-Rule:MF_00996};; Menaquinone biosynthetic enzyme MqnD {ECO:0000256|HAMAP-Rule:MF_00996}; TaxID=37906
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADJ8_GEMAT
hypothetical protein
cn_combo_scaffold_917_19
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19882..20862
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MES0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF19210.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
glyoxalase/bleomycin resistance protein/dioxygenase
cn_combo_scaffold_917_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20967..21905
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9C1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39098.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_917_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22136..23602
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9C0_GEMAT
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH39097.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_917_22
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23586..24785)
DNA (1200bp) protein (400aa)
Uncharacterized protein {ECO:0000313|EMBL:KFE66886.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
cn_combo_scaffold_917_23
unknown

Not on your lists

25048..26496
DNA (1449bp) protein (483aa)

This feature has no annotations

cn_combo_scaffold_917_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26551..27222)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11LH3_MESSB
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AHG90400.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_917_25
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27757..29031
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXF0_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37021.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
cn_combo_scaffold_917_26
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29042..30538
DNA (1497bp) protein (499aa)
Anion transporter n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HY68_PARL1
Anion transporter {ECO:0000313|EMBL:EWY39551.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiires
anion transporter
cn_combo_scaffold_917_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

30680..33541
DNA (2862bp) protein (954aa)
AMP-dependent synthetase and ligase id=3488728 bin=GWC2_Methylomirabilis_70_24 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
AMP-dependent synthetase and ligase Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
cn_combo_scaffold_917_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(33641..36106)
DNA (2466bp) protein (822aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035CC200
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
efflux ABC transporter inner membrane protein
cn_combo_scaffold_917_29
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

36356..36898
DNA (543bp) protein (181aa)
cytochrome c oxidase subunit II; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
Cytochrome c oxidase, subunit II n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3T9_THERP
cytochrome c oxidase subunit II
cn_combo_scaffold_917_30
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

36950..38353
DNA (1404bp) protein (468aa)
cytochrome c oxidase, subunit I (EC:1.9.3.1) Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
cytochrome c oxidase, subunit I (EC:1.9.3.1) id=12554038 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cytochrome c oxidase, subunit I (EC:1.9.3.1)
Displaying items 1-30 of 85 in total

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