ggKbase home page

cn_combo_scaffold_1226

Alias: GEM22_31

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1226_1
unknown

Not on your lists

111..989
DNA (879bp) protein (293aa)

This feature has no annotations

cn_combo_scaffold_1226_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1156..3714)
DNA (2559bp) protein (853aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY4_GEMAT
ATP-dependent protease La rbh
cn_combo_scaffold_1226_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3916..4749)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A683_GEMAT
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH37743.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_1226_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4943..5629
DNA (687bp) protein (229aa)
MarR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A682_GEMAT
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:BAH37742.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas auranti
cn_combo_scaffold_1226_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


5678..7015
DNA (1338bp) protein (446aa)
Signal recognition particle protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY3_GEMAT
ffh; signal recognition particle protein rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmati
cn_combo_scaffold_1226_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


7163..7483
DNA (321bp) protein (107aa)
30S ribosomal protein S16 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RS16_GEMAT
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000255|HAMAP-Rule:MF_00385}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (str
cn_combo_scaffold_1226_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7491..8036
DNA (546bp) protein (182aa)
16S rRNA-processing protein RimM n=1 Tax=Amycolatopsis RepID=UPI0002625E1A
Ribosome maturation factor rimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_1226_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8033..8734
DNA (702bp) protein (234aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAW8_GEMAT
tRNA (guanine-N(1)-)-methyltransferase
cn_combo_scaffold_1226_9
unknown

Not on your lists

8816..9367
DNA (552bp) protein (184aa)

This feature has no annotations

cn_combo_scaffold_1226_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


9480..9854
DNA (375bp) protein (125aa)
50S ribosomal protein L19 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAT2_GEMAT
50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_1226_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9873..10529
DNA (657bp) protein (219aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAT1_GEMAT
cn_combo_scaffold_1226_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10534..11382
DNA (849bp) protein (283aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAT0_GEMAT
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:AHG91355.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_1226_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11596..12243
DNA (648bp) protein (216aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAS9_GEMAT
OmpA/MotB domain protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AHG91354.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_1226_trna_1
unknown

Not on your lists

12394..12466
DNA (73bp)
transferRNA
cn_combo_scaffold_1226_14
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12496..13404)
DNA (909bp) protein (303aa)
Beta-lactamase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QP24_9DELT
Beta-lactamase {ECO:0000313|EMBL:KFA90478.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter
beta-lactamase
cn_combo_scaffold_1226_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13538..14017
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
cn_combo_scaffold_1226_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14370..16109
DNA (1740bp) protein (580aa)
Putative transglycosylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U3_GEMAT
putative transglycosylase rbh
Putative transglycosylase {ECO:0000313|EMBL:BAH39270.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain
cn_combo_scaffold_1226_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16164..16856)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U2_GEMAT
Lytic transglycosylase catalytic
Lytic transglycosylase catalytic {ECO:0000313|EMBL:AHG91336.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_1226_18
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16937..17413)
DNA (477bp) protein (159aa)
molybdenum cofactor biosynthesis protein MoaC n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A6335
Molybdenum cofactor biosynthesis C, bacterial-type
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1434929 species="Bac
cn_combo_scaffold_1226_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17502..18587)
DNA (1086bp) protein (362aa)
DNA polymerase III delta' subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U0_GEMAT
DNA polymerase III delta' subunit
DNA polymerase III delta' subunit {ECO:0000313|EMBL:AHG91334.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_1226_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18614..20206)
DNA (1593bp) protein (531aa)
Amidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YF7_SOLUE
Amidase
Amidase {ECO:0000313|EMBL:AHG93900.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_1226_21
Deinococcus deserti, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(20218..21021)
DNA (804bp) protein (268aa)
Putative dipeptide/oligopeptide/nickel ABC transporter, permease component n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1D2B5_DEIDV
dipeptide/oligopeptide/nickel ABC transporter permease
Putative dipeptide/oligopeptide/nickel ABC transporter, permease component {ECO:0000313|EMBL:ACO47554.1}; TaxID=546414 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae
cn_combo_scaffold_1226_22
Deinococcus deserti, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(21018..21971)
DNA (954bp) protein (318aa)
peptide ABC transporter permease n=1 Tax=Deinococcus apachensis RepID=UPI000361747A
dipeptide/oligopeptide/nickel ABC transporter permease
Putative dipeptide/oligopeptide/nickel ABC transporter, permease component {ECO:0000313|EMBL:ACO47555.1}; TaxID=546414 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae
cn_combo_scaffold_1226_23
Deinococcus deserti, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(21982..23604)
DNA (1623bp) protein (541aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00036827E9
dipeptide ABC transporter, periplasmic component rbh
Putative dipeptide ABC transporter, periplasmic component {ECO:0000313|EMBL:ACO47556.1}; TaxID=546414 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;"
cn_combo_scaffold_1226_24
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(23601..25346)
DNA (1746bp) protein (582aa)
Putative aminopeptidase n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A6D2_DEIPD
aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:AFZ69443.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitori
cn_combo_scaffold_1226_25
unknown

Not on your lists

25753..26262
DNA (510bp) protein (170aa)

This feature has no annotations

cn_combo_scaffold_1226_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

26379..29684
DNA (3306bp) protein (1102aa)
tricorn protease (EC:3.4.21.-); K08676 tricorn protease [EC:3.4.21.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Tricorn protease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAV8_GEMAT
peptidase S41
cn_combo_scaffold_1226_27
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(29845..31077)
DNA (1233bp) protein (411aa)
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase (EC:3.5.1.26); K01444 N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R5W7_ISOPI
putative asparaginase
cn_combo_scaffold_1226_28
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(31142..32551)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI0_GEMAT
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAH39857.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_1226_29
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

32747..35968
DNA (3222bp) protein (1074aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01U29_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ86841.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
hypothetical protein
Displaying items 1-30 of 35 in total

View Taxonomy