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cn_combo_scaffold_1419

Alias: GEM22_34

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1419_1
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

comp(90..755)
DNA (666bp) protein (222aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
cn_combo_scaffold_1419_2
unknown

Not on your lists

comp(1282..1800)
DNA (519bp) protein (173aa)

This feature has no annotations

cn_combo_scaffold_1419_3
unknown

Not on your lists

comp(2117..2512)
DNA (396bp) protein (132aa)

This feature has no annotations

cn_combo_scaffold_1419_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3088..4590)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YG11_SORCE
N-6 DNA methylase rbh
N-6 DNA methylase {ECO:0000313|EMBL:AHG89838.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_1419_5
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4587..5177)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037D2CD1
Uncharacterized protein {ECO:0000313|EMBL:KFA90859.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
cn_combo_scaffold_1419_6
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5179..5628)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALM2T RepID=UPI000382327B
Uncharacterized protein {ECO:0000313|EMBL:KFA90858.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
DNA binding domain, excisionase family
cn_combo_scaffold_1419_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5744..6646)
DNA (903bp) protein (301aa)
restriction endonuclease n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000379498E
restriction endonuclease rbh
Restriction endonuclease {ECO:0000313|EMBL:AHG89836.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_1419_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6643..7998)
DNA (1356bp) protein (452aa)
Restriction modification system DNA specificity domain protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UDD0_9GAMM
restriction modification system DNA specificity domain-containing protein rbh
Restriction modification system DNA specificity domain-containing protein {ECO:0000313|EMBL:AHG89835.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;
cn_combo_scaffold_1419_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7995..10910)
DNA (2916bp) protein (972aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YA83_SORCE
Type III restriction protein res subunit {ECO:0000313|EMBL:AHG89834.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
type III restriction protein res subunit rbh
cn_combo_scaffold_1419_10
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(11711..13462)
DNA (1752bp) protein (584aa)
uvrD/REP helicase family protein; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
Uncharacterized protein n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) RepID=S8A7F1_DACHA
cn_combo_scaffold_1419_11
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(13416..15257)
DNA (1842bp) protein (614aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LFE6_BURGS
OLD family ATP-dependent endonuclease Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
hypothetical protein
cn_combo_scaffold_1419_12
unknown

Not on your lists

comp(15331..15795)
DNA (465bp) protein (155aa)

This feature has no annotations

cn_combo_scaffold_1419_13
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(16129..18933)
DNA (2805bp) protein (935aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IH04_PHYMF
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAM04542.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensi
cn_combo_scaffold_1419_14
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19826..20320)
DNA (495bp) protein (165aa)
Transposase ISRM3 n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGU8_9RHIZ
Transposase ISRM3 {ECO:0000313|EMBL:ESX69966.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC4
ISMca5, transposase
cn_combo_scaffold_1419_15
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20320..21168)
DNA (849bp) protein (283aa)
Transposase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F883_9BURK
Transposase {ECO:0000313|EMBL:EHK65516.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY
transposase
cn_combo_scaffold_1419_16
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21162..21428)
DNA (267bp) protein (89aa)
Insertion element ISR1 hypothetical 10 kDa protein A3 n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W9M2_MAGSA
hypothetical protein
Insertion element ISR1 hypothetical 10 kDa protein A3 {ECO:0000313|EMBL:BAE49453.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetosp
cn_combo_scaffold_1419_17
unknown

Not on your lists

comp(22209..22598)
DNA (390bp) protein (130aa)

This feature has no annotations

cn_combo_scaffold_1419_18
unknown

Not on your lists

22854..23108
DNA (255bp) protein (85aa)

This feature has no annotations

cn_combo_scaffold_1419_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23412..25916)
DNA (2505bp) protein (835aa)
Ribonucleoside-diphosphate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X4_GEMAT
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:AHG90384.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent rbh
cn_combo_scaffold_1419_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26412..28319)
DNA (1908bp) protein (636aa)
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X1_GEMAT
cell wall hydrolase/autolysin
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:AHG90381.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_1419_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

28589..29728
DNA (1140bp) protein (380aa)
Putative serine/threonine protein phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X0_GEMAT
protein phosphatase 2C domain protein
Protein phosphatase 2C domain protein {ECO:0000313|EMBL:AHG90380.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_1419_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(29735..30571)
DNA (837bp) protein (279aa)
glycosidase (EC:3.2.1.-); K05349 beta-glucosidase [EC:3.2.1.21] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Beta-glucosidase-like glycosyl hydrolase n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L5Z5_9CYAN
glycoside hydrolase family 3 domain protein
cn_combo_scaffold_1419_23
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

30712..31647
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HL26_CYAP4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL45258.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC
cn_combo_scaffold_1419_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(31655..32782)
DNA (1128bp) protein (376aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W8_GEMAT
Anhydro-N-acetylmuramic acid kinase
cn_combo_scaffold_1419_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(32848..33825)
DNA (978bp) protein (326aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMA
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W7_GEMAT
N-acetylmuramic acid 6-phosphate etherase rbh
cn_combo_scaffold_1419_26
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

33871..34569
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37976.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_1419_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

34679..36367
DNA (1689bp) protein (563aa)
Gamma-glutamyltranspeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W5_GEMAT
gamma-glutamyltransferase
Gamma-glutamyltransferase {ECO:0000313|EMBL:AHG90374.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 27 items

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