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cn_combo_scaffold_2253

Alias: GEM22_45

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2253_1
unknown

Not on your lists

comp(2..439)
DNA (438bp) protein (146aa)

This feature has no annotations

cn_combo_scaffold_2253_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(467..847)
DNA (381bp) protein (127aa)
Flagellar motor switch protein FliN n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A552_GEMAT
fliN; flagellar motor switch protein FliN
Flagellar motor switch protein FliN {ECO:0000313|EMBL:BAH37362.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiac
cn_combo_scaffold_2253_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(895..1884)
DNA (990bp) protein (330aa)
Flagellar motor switch protein FliM n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A553_GEMAT
fliM; flagellar motor switch protein FliM
Flagellar motor switch protein FliM {ECO:0000313|EMBL:BAH37363.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiac
cn_combo_scaffold_2253_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1892..2407)
DNA (516bp) protein (172aa)
Flagellar FliL protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A554_GEMAT
fliL; flagellar FliL protein
Flagellar FliL protein {ECO:0000313|EMBL:BAH37364.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-2
cn_combo_scaffold_2253_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2720..4021)
DNA (1302bp) protein (434aa)
Flagellar hook protein FlgE n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WGB8_9SPIO
flagellar hook-basal body protein
Flagellar hook-basal body protein {ECO:0000313|EMBL:AHG87731.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2253_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4046..4825)
DNA (780bp) protein (260aa)
Flagellar hook capping protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XPZ9_9BACT
flagellar hook capping protein
Flagellar hook capping protein {ECO:0000313|EMBL:AHG87730.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2253_7
unknown

Not on your lists

comp(4830..6551)
DNA (1722bp) protein (574aa)

This feature has no annotations

cn_combo_scaffold_2253_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6555..7169)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A558_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37368.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_2253_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7166..7636)
DNA (471bp) protein (157aa)
Putative flagellar FliJ protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A559_GEMAT
flagellar export protein FliJ
Flagellar export protein FliJ {ECO:0000313|EMBL:AHG87726.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2253_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7651..8955)
DNA (1305bp) protein (435aa)
Flagellum-specific ATP synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A560_GEMAT
ATPase, FliI/YscN family
ATPase, FliI/YscN family {ECO:0000313|EMBL:AHG87725.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2253_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9264..10142)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A561_GEMAT
Flagellar assembly protein FliH/Type III secretion system HrpE
Flagellar assembly protein FliH/Type III secretion system HrpE {ECO:0000313|EMBL:AHG87724.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2253_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10142..11167)
DNA (1026bp) protein (342aa)
Flagellar motor switch protein FliG n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A562_GEMAT
flagellar motor switch protein FliG
Flagellar motor switch protein FliG {ECO:0000313|EMBL:AHG87723.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2253_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11217..12752)
DNA (1536bp) protein (512aa)
Flagellar M-ring protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A563_GEMAT
flagellar M-ring protein FliF
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2253_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12756..13094)
DNA (339bp) protein (113aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A564_GEMAT
Flagellar hook-basal body complex protein fliE
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium
cn_combo_scaffold_2253_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13098..13466)
DNA (369bp) protein (123aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87720.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2253_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13503..14192)
DNA (690bp) protein (230aa)
Flagellar basal-body rod protein FlgC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A566_GEMAT
flagellar basal-body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2253_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14204..14491)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A567_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87718.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2253_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14770..16305)
DNA (1536bp) protein (512aa)
Putative NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A568_GEMAT
putative NtrC family two-component response regulator
Putative NtrC family two-component response regulator {ECO:0000313|EMBL:BAH37378.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemm
cn_combo_scaffold_2253_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16421..17344
DNA (924bp) protein (308aa)
Flagellar hook-associated protein 3 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A569_GEMAT
flagellin domain protein
Flagellin domain protein {ECO:0000313|EMBL:AHG87711.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2253_20
Treponema medium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17402..17890
DNA (489bp) protein (163aa)
Flagellar assembly factor FliW n=1 Tax=Treponema medium ATCC 700293 RepID=S3JY55_TREMD
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=1125700 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema medium ATCC 700293.;"
flagellar assembly protein FliW
cn_combo_scaffold_2253_21
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18210..19331
DNA (1122bp) protein (374aa)
Flagellin/flagellar hook associated protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K5E0_CLOPA
flagellin/flagellar hook associated protein
Flagellin/flagellar hook associated protein {ECO:0000313|EMBL:AGK97788.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium past
cn_combo_scaffold_2253_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19531..22218
DNA (2688bp) protein (896aa)
Flagellar hook-associated protein 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A585_GEMAT
fliD; flagellar hook-associated protein 2
Flagellar hook-associated protein 2 {ECO:0000313|EMBL:BAH37395.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiac
cn_combo_scaffold_2253_23
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22306..22728
DNA (423bp) protein (141aa)
Flagellar protein FliS n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A586_GEMAT
fliS; flagellar protein FliS
Flagellar protein FliS {ECO:0000313|EMBL:BAH37396.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-2
cn_combo_scaffold_2253_24
unknown

Not on your lists

22730..23104
DNA (375bp) protein (125aa)

This feature has no annotations

cn_combo_scaffold_2253_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23183..23503
DNA (321bp) protein (107aa)
Anti-sigma-28 factor FlgM family protein
Anti-sigma-28 factor FlgM family protein {ECO:0000313|EMBL:AHG87703.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_2253_26
Hymenolepis microstoma, Hymenolepis, Cyclophyllidea, Eucestoda, Platyhelminthes, Metazoa

Not on your lists

23703..24290
DNA (588bp) protein (196aa)
PREDICTED: NFX1-type zinc finger-containing protein 1-like n=1 Tax=Ficedula albicollis RepID=UPI000359E484
Uncharacterized protein {ECO:0000313|EMBL:CDS27049.1}; TaxID=85433 species="Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Hymenolepididae; Hymenolepis.;" source="Hymenolepis
NFX1-type zinc finger-containing protein 1-like
Displaying 26 items

View Taxonomy