ggKbase home page

cn_combo_scaffold_2529

Alias: MIC18_74

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2529_1
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..780)
DNA (780bp) protein (260aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
dihydrodipicolinate synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035E12D1
dihydrodipicolinate synthase/N-acetylneuraminate lyase
cn_combo_scaffold_2529_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(822..1583)
DNA (762bp) protein (254aa)
Putative ketoacyl reductase {ECO:0000313|EMBL:KJL36329.1}; EC=1.3.1.- {ECO:0000313|EMBL:KJL36329.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F0E404
short-chain dehydrogenase of various substrate specificities
cn_combo_scaffold_2529_3
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1585..2115)
DNA (531bp) protein (177aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002FF4264
dihydrofolate reductase
cn_combo_scaffold_2529_4
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2112..2930)
DNA (819bp) protein (273aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
thymidylate synthase n=1 Tax=Microbacterium yannicii RepID=UPI0003131BEA
thyA; thymidylate synthase
cn_combo_scaffold_2529_5
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2998..3435
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002FC8F6F
Uncharacterized protein {ECO:0000313|EMBL:EPD86891.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 st
thiol-disulfide isomerase and thioredoxins
cn_combo_scaffold_2529_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3428..3946
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D8A59
Uncharacterized protein {ECO:0000313|EMBL:CDK01241.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
cn_combo_scaffold_2529_7
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4045..4470
DNA (426bp) protein (142aa)
Redox protein, regulator of disulfide bondformation n=1 Tax=Microbacterium sp. TS-1 RepID=U2XK34_9MICO
Redox protein, regulator of disulfide bondformation {ECO:0000313|EMBL:GAD33530.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbac
redox protein, regulator of disulfide bond formation
cn_combo_scaffold_2529_8
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4463..5371
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036F6E02
nucleoside-diphosphate sugar epimerase
Predicted nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:BAJ73285.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacteri
cn_combo_scaffold_2529_9
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5372..7678)
DNA (2307bp) protein (769aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000313|EMBL:KJL26385.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL26385.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteri
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031FF127
hypothetical protein
cn_combo_scaffold_2529_10
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7675..8346)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349F165
Macrolide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYT58798.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium
antimicrobial peptide ABC transporter ATPase
cn_combo_scaffold_2529_11
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8343..9977)
DNA (1635bp) protein (545aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002FBE287
RecG-like helicase {ECO:0000313|EMBL:GAD35377.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
cn_combo_scaffold_2529_12
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10015..10980)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DDEEF7
Malate synthase {ECO:0000313|EMBL:GAD35376.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein
cn_combo_scaffold_2529_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11114..11563)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035DE31C
Uncharacterized protein {ECO:0000313|EMBL:CDK01238.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
cn_combo_scaffold_2529_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11560..12378)
DNA (819bp) protein (273aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
dihydrodipicolinate reductase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000370CE01
dihydrodipicolinate reductase
cn_combo_scaffold_2529_15
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12400..13044)
DNA (645bp) protein (215aa)
histidine phosphatase n=1 Tax=Microbacterium yannicii RepID=UPI0002F9B245
fructose-2,6-bisphosphatase
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:BAJ73290.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain
cn_combo_scaffold_2529_16
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13089..14126)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002ECE566
Oxidoreductase {ECO:0000313|EMBL:KIC56446.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
oxidoreductase
cn_combo_scaffold_2529_17
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14334..16589)
DNA (2256bp) protein (752aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274805}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595, ECO:0000256|SAAS:SAAS00274803};; Polynucleotide
polynucleotide phosphorylase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000371CC37
pnp; polyribonucleotide nucleotidyltransferase
cn_combo_scaffold_2529_18
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16864..18915)
DNA (2052bp) protein (684aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002ECEF6B
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:BAJ73294.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037)
cn_combo_scaffold_2529_19
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19052..19636
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B5ECA6
hypothetical protein
Uncharacterized membrane-associated protein {ECO:0000313|EMBL:BAJ73295.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium te
cn_combo_scaffold_2529_20
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19718..20458
DNA (741bp) protein (247aa)
Transcriptional regulatory protein n=2 Tax=Microbacterium RepID=H8E289_9MICO
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-
response regulator of citrate/malate metabolism
cn_combo_scaffold_2529_21
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20401..21045)
DNA (645bp) protein (215aa)
FMN reductase (NADPH) {ECO:0000313|EMBL:KJQ53088.1}; EC=1.5.1.38 {ECO:0000313|EMBL:KJQ53088.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" so
NADPH-dependent FMN reductase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003650C2F
flavoprotein
cn_combo_scaffold_2529_22
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21047..22282)
DNA (1236bp) protein (412aa)
N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Microbacterium yannicii RepID=UPI00030FBB04
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:BAJ73300.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacteri
cn_combo_scaffold_2529_23
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22406..23506
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036F8B97
Fucose 4-O-acetylase {ECO:0000313|EMBL:CDJ99130.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
fucose 4-O-acetylase
cn_combo_scaffold_2529_24
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23558..24583
DNA (1026bp) protein (342aa)
2-oxobutyrate oxidase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000374DB06
Isopenicillin N synthase {ECO:0000313|EMBL:CDK01946.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
isopenicillin N synthase
cn_combo_scaffold_2529_25
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24649..26181)
DNA (1533bp) protein (511aa)
asparaginase (EC:3.5.1.1) rbh
Uncharacterized protein (Fragment) n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1YZG7_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ERI40885.1}; Flags: Fragment;; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
cn_combo_scaffold_2529_26
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(26496..26765)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=2 Tax=Microbacterium RepID=H8E283_9MICO
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="
rpsO; 30S ribosomal protein S15
cn_combo_scaffold_2529_27
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26912..27919
DNA (1008bp) protein (336aa)
membrane protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D76A08
Uncharacterized protein {ECO:0000313|EMBL:CDJ99137.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
permease of the drug/metabolite transporter (DMT) superfamily
cn_combo_scaffold_2529_28
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27879..28436)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000373BE40
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:BAJ73311.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (s
Displaying 28 items

View Taxonomy