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cn_combo_scaffold_3816

Alias: MIC18_116

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3816_1
Lachancea lanzarotensis, Lachancea, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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1..846
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Phaseolus vulgaris RepID=V7BR10_PHAVU
ImpA family type VI secretion-associated protein
LALA0S15e00100g1_1 {ECO:0000313|EMBL:CEP64908.1}; TaxID=1245769 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Lachancea.;" s
cn_combo_scaffold_3816_2
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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857..3475
DNA (2619bp) protein (873aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036FFC9B
LuxR family transcriptional regulator {ECO:0000313|EMBL:KDA06406.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
cn_combo_scaffold_3816_3
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3503..4309
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D7783E
Uncharacterized protein {ECO:0000313|EMBL:CCH68520.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
hypothetical protein
cn_combo_scaffold_3816_4
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4296..5021
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E0Q2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CCH68519.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
cn_combo_scaffold_3816_5
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4953..6473)
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030A7FCD
GTP-binding protein {ECO:0000313|EMBL:KDA06405.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
cn_combo_scaffold_3816_6
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6470..8389)
DNA (1920bp) protein (640aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036C75F4
Isoniazid-inducible protein iniA {ECO:0000313|EMBL:KDA06404.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein rbh
cn_combo_scaffold_3816_7
unknown

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comp(8386..8622)
DNA (237bp) protein (79aa)

This feature has no annotations

cn_combo_scaffold_3816_8
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8740..9714)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031533F8
Uncharacterized protein {ECO:0000313|EMBL:KGJ86687.1}; Flags: Precursor;; TaxID=28229 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwe
hypothetical protein
cn_combo_scaffold_3816_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9919..11118
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000374A36E
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:BAJ73777.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (str
cn_combo_scaffold_3816_10
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11257..11937)
DNA (681bp) protein (227aa)
infB; translation initiation factor IF-2 (EC:2.7.7.4)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F6DE20
Cation transport ATPase {ECO:0000313|EMBL:EZP29074.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
cn_combo_scaffold_3816_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11934..13064)
DNA (1131bp) protein (377aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
O-sialoglycoprotein endopeptidase n=1 Tax=Microbacterium yannicii RepID=UPI00037BBC52
metal-dependent protease with possible chaperone activity
cn_combo_scaffold_3816_12
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13061..13594)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Microbacterium RepID=UPI00038210A9
Acetyltransferase {ECO:0000313|EMBL:EZP29072.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
acetyltransferase
cn_combo_scaffold_3816_13
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(13591..14262)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000360CF3B
Peptidase {ECO:0000313|EMBL:KHK99855.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
inactive homolog of metal-dependent protease, molecular chaperone
cn_combo_scaffold_3816_14
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14313..14813)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000380D4BF
Putative ATP-binding protein {ECO:0000313|EMBL:EZP29070.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
alr; ATPase or kinase
cn_combo_scaffold_3816_15
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(14855..15175)
DNA (321bp) protein (107aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1348253 species="Bacteria; Actino
alanine racemase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037F24E7
alr; alanine racemase
Displaying 15 items

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