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cn_combo_scaffold_3519

Alias: PHE14_29

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3519_1
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..735
DNA (735bp) protein (245aa)
NADH dehydrogenase I, M subunit n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC06_PHEZH
nuoM; NADH dehydrogenase subunit M
NADH dehydrogenase I, M subunit {ECO:0000313|EMBL:ACG78203.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Pheny
cn_combo_scaffold_3519_2
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

751..2193
DNA (1443bp) protein (481aa)
nuoN; NADH dehydrogenase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
NADH-quinone oxidoreductase subunit N n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC05_PHEZH
nuoN; NADH dehydrogenase subunit N
cn_combo_scaffold_3519_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2194..2949
DNA (756bp) protein (252aa)
Biotin protein ligase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC04_PHEZH
biotin--protein ligase
Biotin protein ligase {ECO:0000313|EMBL:ACG78201.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacteriu
cn_combo_scaffold_3519_4
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2933..3709
DNA (777bp) protein (259aa)
pantothenate kinase; K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Type III pantothenate kinase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=COAX_PHEZH
pantothenate kinase
cn_combo_scaffold_3519_5
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3709..5388
DNA (1680bp) protein (560aa)
Metallo-beta-lactamase family protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC02_PHEZH
metallo-beta-lactamase
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:ACG78199.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source=
cn_combo_scaffold_3519_6
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5443..5865
DNA (423bp) protein (141aa)
Lactoylglutathione lyase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC01_PHEZH
lactoylglutathione lyase
Lactoylglutathione lyase {ECO:0000313|EMBL:ACG78198.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacte
cn_combo_scaffold_3519_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5976..6239
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC00_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_3519_8
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6394..7695
DNA (1302bp) protein (434aa)
ABC-type transport system, involved in lipoprotein release, permease component n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBZ8_PHEZH
lipoprotein release ABC transporter permease; K09808 lipoprotein-releasing system permease protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
lipoprotein release ABC transporter permease
cn_combo_scaffold_3519_9
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7688..8374
DNA (687bp) protein (229aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacte
ABC transporter, ATP-binding protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBZ7_PHEZH
ABC transporter ATP-binding protein
cn_combo_scaffold_3519_10
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8371..8796)
DNA (426bp) protein (142aa)
glyoxalase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003669567
Uncharacterized protein {ECO:0000313|EMBL:EKF25242.1}; TaxID=1122247 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium hassiacum DSM 44199.
glyoxalase/bleomycin resistance protein/dioxygenase
cn_combo_scaffold_3519_11
unknown

Not on your lists

8895..8984
DNA (90bp) protein (30aa)

This feature has no annotations

cn_combo_scaffold_3519_12
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9189..12440
DNA (3252bp) protein (1084aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobac
DNA polymerase III, alpha subunit n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBZ6_PHEZH
dnaE; DNA polymerase III subunit alpha
cn_combo_scaffold_3519_13
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12645..13463
DNA (819bp) protein (273aa)
30S ribosomal protein S2 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=RS2_PHEZH
rpsB; 30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000255|HAMAP-Rule:MF_00291}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylob
cn_combo_scaffold_3519_14
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13564..14499
DNA (936bp) protein (312aa)
Elongation factor Ts n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=EFTS_PHEZH
tsf; elongation factor EF-Ts rbh
Elongation factor Ts {ECO:0000255|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000255|HAMAP-Rule:MF_00050};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacte
cn_combo_scaffold_3519_15
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14596..15315
DNA (720bp) protein (240aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Uridylate kinase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBZ2_PHEZH
pyrH; uridylate kinase
cn_combo_scaffold_3519_16
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15357..15923
DNA (567bp) protein (189aa)
PREDICTED: ribosome-recycling factor, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C157CC
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
ribosome recycling factor
cn_combo_scaffold_3519_17
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15959..16714
DNA (756bp) protein (252aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacte
Isoprenyl transferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBZ0_PHEZH
uppS; undecaprenyl diphosphate synthase
cn_combo_scaffold_3519_18
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16692..17534
DNA (843bp) protein (281aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales;
Phosphatidate cytidylyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBY9_PHEZH
cdsA; phosphatidate cytidylyltransferase
cn_combo_scaffold_3519_19
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17522..18715
DNA (1194bp) protein (398aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBY8_PHEZH
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
cn_combo_scaffold_3519_20
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18734..19951
DNA (1218bp) protein (406aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacterace
Membrane-associated zinc metalloprotease n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBY7_PHEZH
membrane-associated zinc metalloprotease
cn_combo_scaffold_3519_21
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19983..22385
DNA (2403bp) protein (801aa)
Outer membrane protein assembly factor BamA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBY6_PHEZH
outer membrane protein; K07277 outer membrane protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
outer membrane protein
cn_combo_scaffold_3519_22
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22395..23057
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBY5_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG78182.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_3519_23
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23100..24116
DNA (1017bp) protein (339aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curat
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Caulobacter sp. AP07 RepID=J2P399_9CAUL
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
cn_combo_scaffold_3519_24
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24113..24580
DNA (468bp) protein (156aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBY3_PHEZH
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase
cn_combo_scaffold_3519_25
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24577..25374
DNA (798bp) protein (266aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBY2_PHEZH
lpxA; UDP-N-acetylglucosamine acyltransferase
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
cn_combo_scaffold_3519_26
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25490..26206
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2ZRL5_9CAUL
hypothetical protein; K09949 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
cn_combo_scaffold_3519_27
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26224..27363
DNA (1140bp) protein (380aa)
Lipid-A-disaccharide synthase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBY0_PHEZH
lpxB; lipid-A-disaccharide synthase
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:ACG78177.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylo
cn_combo_scaffold_3519_28
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27427..28707)
DNA (1281bp) protein (427aa)
citrate synthase; K01647 citrate synthase [EC:2.3.3.1] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Citrate synthase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBX9_PHEZH
citrate synthase
cn_combo_scaffold_3519_29
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28766..29260)
DNA (495bp) protein (165aa)
Glutamate--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS {ECO:0000255|HAMAP-Rul
Glutamate--tRNA ligase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=SYE_PHEZH
gltX; glutamyl-tRNA synthetase
Displaying 29 items

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