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cn_combo_scaffold_5582

Alias: PHE14_65

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5582_1
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(65..820)
DNA (756bp) protein (252aa)
Response regulator of the LytR/AlgR family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCH1_PHEZH
response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:ACG76570.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" so
cn_combo_scaffold_5582_2
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1076..2275
DNA (1200bp) protein (400aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000255|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000255|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000255|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=SUCC_PHEZH
sucC; succinyl-CoA synthetase subunit beta rbh
cn_combo_scaffold_5582_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2275..3153
DNA (879bp) protein (293aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulo
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCH4_PHEZH
sucD; succinyl-CoA synthetase subunit alpha
cn_combo_scaffold_5582_4
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3268..6222
DNA (2955bp) protein (985aa)
sucA; 2-oxoglutarate dehydrogenase E1; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
2-oxoglutarate dehydrogenase E1 subunit (EC:1.2.4.2)
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VP03_CAUST
cn_combo_scaffold_5582_5
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6276..7493
DNA (1218bp) protein (406aa)
dihydrolipoamide acetyltransferase (EC:2.3.1.61); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase sucB n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCH6_PHEZH
sucB; dihydrolipoamide succinyltransferase
cn_combo_scaffold_5582_6
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7551..7796
DNA (246bp) protein (82aa)
SpoVT/AbrB domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T3D5_CAUSK
SpoVT/AbrB domain-containing protein
SpoVT/AbrB domain protein {ECO:0000313|EMBL:ABZ69370.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp.
cn_combo_scaffold_5582_7
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7793..8221
DNA (429bp) protein (143aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T3D6_CAUSK
PilT domain-containing protein
cn_combo_scaffold_5582_8
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8260..9657
DNA (1398bp) protein (466aa)
lpdA; 2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Dihydrolipoyl dehydrogenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBA1_PHEZH
lpdA; 2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase
cn_combo_scaffold_5582_9
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

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comp(9708..10241)
DNA (534bp) protein (178aa)
Putative uncharacterized protein {ECO:0000313|EMBL:EGB12627.1}; TaxID=44056 species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anophagefferens (Harmf
cn_combo_scaffold_5582_10
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10333..10533)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCY0_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
cn_combo_scaffold_5582_11
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10706..11905
DNA (1200bp) protein (400aa)
rsmB; 16S rRNA m5C methyltransferase RsmB (EC:2.1.1.-)
16S rRNA m5C methyltransferase RsmB n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GXJ2_CAUCN
rRNA methyltransferase RsmB {ECO:0000313|EMBL:AAK22089.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cr
cn_combo_scaffold_5582_12
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11943..12605
DNA (663bp) protein (221aa)
rpe; ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Q9ABW9_CAUCR
cn_combo_scaffold_5582_13
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13172..13672
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCX7_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG79909.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
Displaying 13 items

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