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cn_combo_scaffold_5948

Alias: PHE14_79

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5948_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..779)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI0003711EEA
Strain MEJ076 contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ02221.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacteri
hypothetical protein
cn_combo_scaffold_5948_trna_1
unknown

Not on your lists

comp(943..1015)
DNA (73bp)
transferRNA
cn_combo_scaffold_5948_2
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1171..1914
DNA (744bp) protein (248aa)
Outer membrane protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RH29_PHEZH
outer membrane protein; K09807 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
outer membrane protein
cn_combo_scaffold_5948_3
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1948..2409)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2GNI1_9CAUL
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_5948_4
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2409..2765)
DNA (357bp) protein (119aa)
Aspartate 1-decarboxylase {ECO:0000255|HAMAP-Rule:MF_00446}; EC=4.1.1.11 {ECO:0000255|HAMAP-Rule:MF_00446};; Aspartate alpha-decarboxylase {ECO:0000255|HAMAP-Rule:MF_00446}; Contains:; Aspartate 1-dec
Aspartate 1-decarboxylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=PAND_PHEZH
panD; aspartate alpha-decarboxylase
cn_combo_scaffold_5948_5
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2990..3868)
DNA (879bp) protein (293aa)
lipase (EC:3.1.1.3) Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
alpha/beta hydrolase family protein (EC:3.1.1.3)
Lipase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GYS5_CAUCN
cn_combo_scaffold_5948_6
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4041..5297
DNA (1257bp) protein (419aa)
Beta-lactamase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RH32_PHEZH
Beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ACG78980.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucin
cn_combo_scaffold_5948_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5302..5655)
DNA (354bp) protein (118aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_5948_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5788..6009
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QX15_BREDI
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_5948_9
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6043..6663
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2H2P9_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL37100.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source
hypothetical protein
cn_combo_scaffold_5948_10
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6673..7176)
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EKJ2_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ58174.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
cn_combo_scaffold_5948_11
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7313..9250)
DNA (1938bp) protein (646aa)
RNA polymerase sigma factor RpoD n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RH36_PHEZH
rpoD; RNA polymerase sigma factor RpoD
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Ca
cn_combo_scaffold_5948_12
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9731..10072
DNA (342bp) protein (114aa)
Integrase catalytic region n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UI28_RHIRD
Integrase catalytic region {ECO:0000313|EMBL:EGP54247.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium;
putative IS21 family transposase, OrfA
Displaying 13 items

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