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cn_combo_scaffold_177

Alias: PHE30_7

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Displaying items 1-30 of 214 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_177_1
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84..1061
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAG6_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein rbh
cn_combo_scaffold_177_2
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1239..1961
DNA (723bp) protein (241aa)
gmk; guanylate kinase; K00942 guanylate kinase [EC:2.7.4.8] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Guanylate kinase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAG7_PHEZH
gmk; guanylate kinase
cn_combo_scaffold_177_3
unknown

Not on your lists

2160..2474
DNA (315bp) protein (105aa)

This feature has no annotations

cn_combo_scaffold_177_4
Roseobacter denitrificans, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2560..3660)
DNA (1101bp) protein (367aa)
Conserved domain protein, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q167L6_ROSDO
hypothetical protein
Conserved domain protein, putative {ECO:0000313|EMBL:ABG31827.1}; TaxID=375451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseoba
cn_combo_scaffold_177_5
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4462..4935
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U9Z9_DEIML
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_177_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5111..5830
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAH1_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_177_7
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5844..6773)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHT9_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG79130.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_177_8
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6958..7869
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A780B9
Uncharacterized protein {ECO:0000313|EMBL:CEA04537.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1
hypothetical protein
cn_combo_scaffold_177_9
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8106..8930
DNA (825bp) protein (275aa)
Uncharacterized protein n=7 Tax=Mycobacterium paratuberculosis RepID=L7DK40_MYCPC
acyl-CoA thioesterase Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
hypothetical protein
cn_combo_scaffold_177_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8995..9336
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037A6D79
Uncharacterized protein {ECO:0000313|EMBL:GAO37843.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
hypothetical protein
cn_combo_scaffold_177_11
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9415..10185
DNA (771bp) protein (257aa)
3-beta-hydroxysteroid dehydrogenase n=1 Tax=Sandarakinorhabdus limnophila RepID=UPI0003B61E62
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase {ECO:0000313|EMBL:EED31368.1}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
short-chain dehydrogenase/reductase SDR
cn_combo_scaffold_177_12
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10210..10983
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8LZR7_9CYAN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ethyl tert-butyl ether degradation EthD
cn_combo_scaffold_177_13
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11276..11629)
DNA (354bp) protein (118aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_177_14
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11782..12468
DNA (687bp) protein (229aa)
Putative acyltransferase n=1 Tax=Caulobacter sp. AP07 RepID=J3AT69_9CAUL
Putative acyltransferase {ECO:0000313|EMBL:EJL36884.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp.
GCN5-like N-acetyltransferase
cn_combo_scaffold_177_15
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12716..13624)
DNA (909bp) protein (303aa)
Conserved predicted permease, DMT superfamily n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD72_PHEZH
permease, DMT superfamily; K11939 inner membrane transporter RhtA Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
permease, DMT superfamily
cn_combo_scaffold_177_16
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13730..14209
DNA (480bp) protein (160aa)
transcription elongation factor n=1 Tax=alpha proteobacterium L41A RepID=UPI0003657FFC
GreA/GreB family elongation factor Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
transcription elongation factor regulatory protein
cn_combo_scaffold_177_17
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14235..15314)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9Y2_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_177_18
unknown

Not on your lists

15533..15736
DNA (204bp) protein (68aa)

This feature has no annotations

cn_combo_scaffold_177_19
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15742..16575
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCN0_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_177_20
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16583..16783)
DNA (201bp) protein (67aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_177_21
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16930..18654)
DNA (1725bp) protein (575aa)
superfamily II DNA and RNA helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Superfamily II DNA and RNA helicase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC78_PHEZH
superfamily II DNA and RNA helicase
cn_combo_scaffold_177_22
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18738..19451)
DNA (714bp) protein (238aa)
Response regulator(With CheY-like receiver domain and winged-helix DNA-binding domain) n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHL6_PHEZH
response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) rbh
Response regulator(With CheY-like receiver domain and winged-helix DNA-binding domain) {ECO:0000313|EMBL:ACG79057.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacteral
cn_combo_scaffold_177_23
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19448..21172)
DNA (1725bp) protein (575aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae;
Osmosensitive K+ channel signal transduction histidine kinase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHL5_PHEZH
osmosensitive K+ channel signal transduction histidine kinase rbh
cn_combo_scaffold_177_24
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21263..22333
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHL4_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
hypothetical protein
cn_combo_scaffold_177_25
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22330..22860
DNA (531bp) protein (177aa)
OmpA family protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHL3_PHEZH
OmpA family protein
OmpA family protein {ECO:0000313|EMBL:ACG79054.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium
cn_combo_scaffold_177_trna_4
unknown

Not on your lists

comp(23082..23155)
DNA (74bp)
transferRNA
cn_combo_scaffold_177_26
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23258..24172)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037FE1F8
Transcriptional regulator {ECO:0000313|EMBL:EJL36888.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp.
LysR family transcriptional regulator
cn_combo_scaffold_177_27
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24250..25674
DNA (1425bp) protein (475aa)
Cytochrome P450 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IF17_METNO
Putative cytochrome P450 {ECO:0000313|EMBL:GAO39875.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
cytochrome P450
cn_combo_scaffold_177_28
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25807..26184
DNA (378bp) protein (126aa)
nuoA; NADH dehydrogenase subunit A (EC:1.6.5.3); K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
NADH-quinone oxidoreductase subunit A n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCM9_PHEZH
nuoA; NADH dehydrogenase subunit A
cn_combo_scaffold_177_29
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26175..26735
DNA (561bp) protein (187aa)
NADH-quinone oxidoreductase subunit B {ECO:0000255|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000255|HAMAP-Rule:MF_01356}; NDH-1 subunit
NADH-quinone oxidoreductase subunit B n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=NUOB_PHEZH
nuoB; NADH dehydrogenase subunit B rbh
Displaying items 1-30 of 214 in total

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