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cn_combo_scaffold_1354

Alias: PHE30_36

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1354_1
unknown

Not on your lists

comp(3..314)
DNA (312bp) protein (104aa)

This feature has no annotations

cn_combo_scaffold_1354_2
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

456..1106
DNA (651bp) protein (217aa)
Outer membrane lipoprotein carrier protein LolA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCY4_PHEZH
lolA; outer membrane lipoprotein carrier protein LolA Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
lolA; outer membrane lipoprotein carrier protein LolA
cn_combo_scaffold_1354_3
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1358..2170
DNA (813bp) protein (271aa)
exodeoxyribonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Exodeoxyribonuclease III n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCY5_PHEZH
exodeoxyribonuclease III
cn_combo_scaffold_1354_4
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2178..2855
DNA (678bp) protein (226aa)
nth; endonuclease III; K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Endonuclease III n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBJ2_PHEZH
nth; endonuclease III
cn_combo_scaffold_1354_5
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2997..5012
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REW6_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_1354_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5050..6840)
DNA (1791bp) protein (597aa)
Peptide transporter n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REW4_PHEZH
peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
peptide transporter
cn_combo_scaffold_1354_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7075..7572
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REW3_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_1354_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7595..8098)
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NDG5_9ACTO
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_1354_9
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8202..9557)
DNA (1356bp) protein (452aa)
glutamate-cysteine ligase; K01919 glutamate--cysteine ligase [EC:6.3.2.2] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Glutamate-cysteine ligase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REW2_PHEZH
glutamate-cysteine ligase rbh
cn_combo_scaffold_1354_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9714..10445)
DNA (732bp) protein (244aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Cau
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REW1_PHEZH
16S ribosomal RNA methyltransferase RsmE
cn_combo_scaffold_1354_11
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10481..11233
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REW0_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_1354_12
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11243..11767
DNA (525bp) protein (175aa)
Shikimate kinase I n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWE9_BREDI
Uncharacterized protein {ECO:0000313|EMBL:KGB54331.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_1354_13
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11906..13165
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REV9_PHEZH
hypothetical protein; K09927 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_1354_14
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13338..13721
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R7U5_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_1354_15
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13855..15642)
DNA (1788bp) protein (596aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REV4_PHEZH
multidrug ABC transporter ATPase and permease; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
multidrug ABC transporter ATPase and permease
cn_combo_scaffold_1354_16
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15973..17364)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WLW0_9SPHN
Polyketide cyclase / dehydrase and lipid transport {ECO:0000313|EMBL:EZP56680.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomona
polyketide cyclase/dehydrase
cn_combo_scaffold_1354_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17361..18308)
DNA (948bp) protein (316aa)
UPI0003CFA014 related cluster n=1 Tax=unknown RepID=UPI0003CFA014
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43627.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
fatty acid desaturase membrane component rbh
cn_combo_scaffold_1354_18
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18311..18622)
DNA (312bp) protein (104aa)
Putative transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J1ERT8_9BURK
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EZP56682.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
ArsR family transcriptional regulator
cn_combo_scaffold_1354_19
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18692..19627
DNA (936bp) protein (312aa)
ubiA; 4-hydroxybenzoate octaprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
PREDICTED: 4-hydroxybenzoate polyprenyltransferase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C139E6
4-hydroxybenzoate polyprenyltransferase
cn_combo_scaffold_1354_20
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20032..20616
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000380C215
transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
transcriptional regulator
cn_combo_scaffold_1354_21
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20616..21617
DNA (1002bp) protein (334aa)
Fatty acid desaturase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REV6_PHEZH
fatty acid desaturase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
fatty acid desaturase
cn_combo_scaffold_1354_22
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21639..22022)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDDAB
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_1354_23
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22049..22699
DNA (651bp) protein (217aa)
Ribosomal protein L11 methyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REV7_PHEZH
50S ribosomal protein L11 methyltransferase
Ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:ACG76945.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" sourc
cn_combo_scaffold_1354_24
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22737..23087
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REV3_PHEZH
hypothetical protein; K06996 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_1354_25
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23177..23488
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REV2_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG76940.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_1354_26
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23550..25310
DNA (1761bp) protein (587aa)
gamma-glutamyltranspeptidase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
Gamma-glutamyltranspeptidase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REJ5_PHEZH
gamma-glutamyltranspeptidase
cn_combo_scaffold_1354_27
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25441..27663
DNA (2223bp) protein (741aa)
integral membrane sensor hybrid histidine kinase (EC:2.7.13.3)
Signal transduction histidine kinase n=1 Tax=Caulobacter sp. AP07 RepID=J2PJR7_9CAUL
Signal transduction histidine kinase {ECO:0000313|EMBL:EJL27577.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobac
cn_combo_scaffold_1354_28
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27722..28072
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REJ4_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG76936.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacter
cn_combo_scaffold_1354_29
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28091..28315)
DNA (225bp) protein (75aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cn_combo_scaffold_1354_30
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28360..29886
DNA (1527bp) protein (509aa)
ubiD; 3-polyprenyl-4-hydroxybenzoate decarboxylase; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
3-polyprenyl-4-hydroxybenzoate decarboxylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4REJ3_PHEZH
ubiD; 3-polyprenyl-4-hydroxybenzoate decarboxylase
Displaying items 1-30 of 39 in total

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