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cn_combo_scaffold_2080

Alias: PHE30_41

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2080_1
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183..854)
DNA (672bp) protein (224aa)
Response regulator(With CheY-like receiver domain and winged-helix DNA-binding domain) n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHQ6_PHEZH
response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain); K02483 two-component system, OmpR family, response regulator Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_cur
response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain)
cn_combo_scaffold_2080_2
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(883..2457)
DNA (1575bp) protein (525aa)
Serine protease HtrA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHQ7_PHEZH
htrA; serine protease HtrA Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
htrA; serine protease HtrA rbh
cn_combo_scaffold_2080_3
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2590..3045)
DNA (456bp) protein (152aa)
Cytochrome c-type biogenesis protein CycL n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHQ8_PHEZH
cycL; cytochrome c-type biogenesis protein CycL
Cytochrome c-type biogenesis protein CycL {ECO:0000313|EMBL:ACG79099.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" sou
cn_combo_scaffold_2080_4
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3042..5015)
DNA (1974bp) protein (658aa)
Cytochrome c-type biogenesis protein CycK n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHQ9_PHEZH
cycK; cytochrome c-type biogenesis protein CycK; K02198 cytochrome c-type biogenesis protein CcmF Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cycK; cytochrome c-type biogenesis protein CycK
cn_combo_scaffold_2080_5
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5012..5530)
DNA (519bp) protein (173aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=CCME_PHEZH
cycJ; cytochrome c-type biogenesis protein CycJ; K02197 cytochrome c-type biogenesis protein CcmE Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cycJ; cytochrome c-type biogenesis protein CycJ
cn_combo_scaffold_2080_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5527..6636)
DNA (1110bp) protein (370aa)
Cytochrome c-type biogenesis protein CycH n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHR1_PHEZH
cycH; cytochrome c-type biogenesis protein CycH; K02200 cytochrome c-type biogenesis protein CcmH Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
cycH; cytochrome c-type biogenesis protein CycH
cn_combo_scaffold_2080_7
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6772..8181)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHR2_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_2080_8
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8261..9658)
DNA (1398bp) protein (466aa)
Sensor histidine kinase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHR3_PHEZH
sensor histidine kinase Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
sensor histidine kinase
cn_combo_scaffold_2080_9
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9655..10347)
DNA (693bp) protein (231aa)
Response regulator(With CheY-like receiver domain and winged-helix DNA-binding domain) n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHR4_PHEZH
response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain); K02483 two-component system, OmpR family, response regulator Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_cur
response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain)
cn_combo_scaffold_2080_10
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10378..10689)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHR5_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_2080_11
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11034..11975)
DNA (942bp) protein (314aa)
DnaJ-class molecular chaperone n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHR6_PHEZH
dnaJ-class molecular chaperone Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
dnaJ-class molecular chaperone
cn_combo_scaffold_2080_12
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12071..12535)
DNA (465bp) protein (155aa)
UPF0260 protein PHZ_c2700 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHR8_PHEZH
hypothetical protein; K09160 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_2080_13
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12616..14430
DNA (1815bp) protein (605aa)
ABC transporter, ATP-binding protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHR9_PHEZH
ABC transporter ATP-binding protein; K15738 ATP-binding cassette, subfamily F, uup Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ABC transporter ATP-binding protein
cn_combo_scaffold_2080_14
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14959..15969
DNA (1011bp) protein (337aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHS0_PHEZH
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein; K02051 NitT/TauT family transport system substrate-binding protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
cn_combo_scaffold_2080_15
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16002..16739
DNA (738bp) protein (246aa)
ABC transporter, ATP-binding protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHS1_PHEZH
ABC transporter ATP-binding protein rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ACG79112.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="
cn_combo_scaffold_2080_16
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16736..17491
DNA (756bp) protein (252aa)
ABC transporter, permease protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHS2_PHEZH
ABC transporter permease; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ABC transporter permease
cn_combo_scaffold_2080_17
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17498..18538)
DNA (1041bp) protein (347aa)
TonB family protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VH86_CAUST
TonB family protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
TonB protein
cn_combo_scaffold_2080_18
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18607..19695)
DNA (1089bp) protein (363aa)
Putative TonB protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHS3_PHEZH
TonB family protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
TonB protein
cn_combo_scaffold_2080_19
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19746..21107)
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHS4_PHEZH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
hypothetical protein
cn_combo_scaffold_2080_20
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21349..22446)
DNA (1098bp) protein (366aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T4E8_CAUSK
cn_combo_scaffold_2080_21
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22673..23410)
DNA (738bp) protein (246aa)
ribosomal small subunit pseudouridine synthase A (EC:4.2.1.70); K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
ribosomal small subunit pseudouridine synthase A (EC:4.2.1.70)
Pseudouridine synthase n=1 Tax=Caulobacter crescentus OR37 RepID=R0D5F1_CAUCE
cn_combo_scaffold_2080_22
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23407..24339)
DNA (933bp) protein (311aa)
rsmC; ribosomal RNA small subunit methyltransferase C; K00564 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Ribosomal RNA small subunit methyltransferase C n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFE1_PHEZH
rsmC; ribosomal RNA small subunit methyltransferase C
cn_combo_scaffold_2080_23
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24342..25946)
DNA (1605bp) protein (535aa)
Peptide chain release factor 3 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RHS5_PHEZH
prfC; peptide chain release factor 3; K02837 peptide chain release factor 3 Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
prfC; peptide chain release factor 3
Displaying 23 items

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