ggKbase home page

cn_combo_scaffold_4981_9

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 6798..7688

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D0X8_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 296.0
  • Bit_score: 523
  • Evalue 1.30e-145
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 296.0
  • Bit_score: 522
  • Evalue 1.10e-145
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEA25830.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivo similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 296.0
  • Bit_score: 522
  • Evalue 5.20e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 891
GTGACCACACCCGGACCACCGCCGCGGCTGCCCGATCCCGGCCACAGCGGTCCGACAGTCCTGCGCATCGTGCTCGGCACCCAGCTGCGCCGGATGCGCGAGGCCAACGGCGTGACCCGGGAGCAGGCGGGCGACCACATCCGCGCCTCCCACGCCAAGATCAGCCGTCTCGAGCTCGGCCGGGTCGGGTTCAAGGAACGCGACATCGCCGACCTGCTCACCCTCTACGGCGTCACCGACCAGCGGGAACGCGACGAGTTCATGGAGCTCGTCACCCAGGCCAACGCCCCCGGCTGGTGGCAGCACTACGGCGACATGCTGCCCAGCTGGTTCGAGATGTACCTGCGGCTCGAACAGGCCGCGTCGGTCATCCGCACCTTCCAGGTGCAGTTCGTCCCCGGCCTGCTGCAGACCGAGGACTACGCCCGTTCCGTCATCGTCGCCGGGCACCAGGGCGAGTCCGTCGAGGACATCGACCGTCGCGTCCAGCTGCGCATGACCCGGCAGAAGCTGCTCACCGAGCCGGGATCGCCGCGGCTGTGGGCGGTCGTCGACGAGGCGGCGCTGCGCAGGCCGTTCGGCCCGCCGCGGGTGATGCGCGGCCAGCTCGACCACCTGATGCAGATGGTCGAGATGCCCAACGTGTCCGTGCAGGTGCTCCCGTTCCGCTTCGGCGGGCACGCCGCCGCGGGCGGGCCGTTCACGATCCTGCGCTTCGCCGAGCCCGACCTGCCCGACATCGTCTACCTCGAGCAGCTCACCAGTGCCGTGTACCTGGAGAAGCGCTCGGAGGTGGAGAGCTACCTCGCCGTCATGGAACGGGTGTGCGTGCAGGCCGAGACGCCGGCCCGCAGCGCCGAGATGCTGATGCGGATCCGCCAGGACCTCTGA
PROTEIN sequence
Length: 297
VTTPGPPPRLPDPGHSGPTVLRIVLGTQLRRMREANGVTREQAGDHIRASHAKISRLELGRVGFKERDIADLLTLYGVTDQRERDEFMELVTQANAPGWWQHYGDMLPSWFEMYLRLEQAASVIRTFQVQFVPGLLQTEDYARSVIVAGHQGESVEDIDRRVQLRMTRQKLLTEPGSPRLWAVVDEAALRRPFGPPRVMRGQLDHLMQMVEMPNVSVQVLPFRFGGHAAAGGPFTILRFAEPDLPDIVYLEQLTSAVYLEKRSEVESYLAVMERVCVQAETPARSAEMLMRIRQDL*