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cn_combo_scaffold_2283

Alias: RHSP15_2

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2283_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1020)
DNA (1020bp) protein (340aa)
Amino acid ABC transporter, substrate-binding component n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ALT4_AZOBR
aapJ; amino acid ABC transporter, substrate-binding component Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
aapJ; amino acid ABC transporter, substrate-binding component
cn_combo_scaffold_2283_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1149..2567)
DNA (1419bp) protein (473aa)
UPI0003CE0A28 related cluster n=1 Tax=unknown RepID=UPI0003CE0A28
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
metalloendopeptidase-like membrane protein
cn_combo_scaffold_2283_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2773..4242)
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00036C8B61
CoA-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
CoA-binding protein
cn_combo_scaffold_2283_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4281..5159
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000375AD3F
pirin; K06911 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
pirin
cn_combo_scaffold_2283_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5172..6737)
DNA (1566bp) protein (522aa)
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein id=2476385 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter periplasmic oligopeptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_73_35_curated
extracellular solute-binding protein
cn_combo_scaffold_2283_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6749..8284)
DNA (1536bp) protein (512aa)
MlrC family protein 3 n=1 Tax=Oceanibaculum indicum P24 RepID=K2IRP4_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
MlrC family protein 3
cn_combo_scaffold_2283_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8296..9234)
DNA (939bp) protein (313aa)
D-cysteine desulfhydrase {ECO:0000313|EMBL:EKE72934.1}; EC=4.4.1.15 {ECO:0000313|EMBL:EKE72934.1};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirill
D-cysteine desulfhydrase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JR53_9PROT
D-cysteine desulfhydrase
cn_combo_scaffold_2283_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9315..10151)
DNA (837bp) protein (279aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A6L2_9PROT
hydrolase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hydrolase
cn_combo_scaffold_2283_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10163..10732)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DG51_9PROT
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_2283_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10729..11436)
DNA (708bp) protein (236aa)
hypothetical protein; K02609 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Uncharacterized protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ATG7_STRRD
hypothetical protein
cn_combo_scaffold_2283_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11448..12380)
DNA (933bp) protein (311aa)
dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Dehydrogenase with different specificities id=4492358 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dehydrogenase
cn_combo_scaffold_2283_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12377..13414)
DNA (1038bp) protein (346aa)
Oxidoreductase FAD-binding subunit n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMU0_TISMK
ndoR; oxidoreductase FAD-binding subunit Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ndoR; oxidoreductase FAD-binding subunit
cn_combo_scaffold_2283_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13471..13974
DNA (504bp) protein (168aa)
Bacterial regulatory protein, MarR n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P0I4_AROAE
putative transcriptional regulator, MarR family Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
marR; transcriptional regulator MarR
cn_combo_scaffold_2283_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13985..15265
DNA (1281bp) protein (427aa)
Major facilitator superfamily MFS_1 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUM0_PARL1
major facilitator superfamily transporter Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
major facilitator superfamily transporter
cn_combo_scaffold_2283_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15262..15762
DNA (501bp) protein (167aa)
Cytosolic Protein n=1 Tax=alpha proteobacterium JLT2015 RepID=M2TKI8_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
thioesterase family protein
cn_combo_scaffold_2283_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15759..16364)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000302293A
hypothetical protein; K07006 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
cn_combo_scaffold_2283_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16379..17242)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z706_AZOL4
conserved protein of unknown function; putative ATPase domain Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_2283_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17366..17791
DNA (426bp) protein (142aa)
Preprotein translocase subunit YajC n=1 Tax=Oceanibaculum indicum P24 RepID=K2JJV2_9PROT
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
yajC; preprotein translocase subunit YajC
cn_combo_scaffold_2283_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17818..19488
DNA (1671bp) protein (557aa)
Protein translocase subunit SecD n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EJV1_BRASB
Preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
secD; Protein-export membrane protein secD
cn_combo_scaffold_2283_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19499..20677
DNA (1179bp) protein (393aa)
Protein-export membrane protein SecF n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S4B9_PHAFV
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
secF; Protein-export membrane protein secF
cn_combo_scaffold_2283_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20674..21078
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00035CD942
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_2283_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21167..21829)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4SYN4_POLSQ
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
membrane protein
cn_combo_scaffold_2283_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21873..22532
DNA (660bp) protein (220aa)
squalene; K02291 phytoene synthase [EC:2.5.1.32] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Phytoene/squalene synthetase-like protein n=2 Tax=Acidiphilium RepID=A5FXR0_ACICJ
phytoene/squalene synthetase-like protein
cn_combo_scaffold_2283_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22555..23439
DNA (885bp) protein (295aa)
Lipase/esterase n=1 Tax=uncultured bacterium RepID=G3C5T0_9BACT
alpha/beta hydrolase fold protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
alpha/beta hydrolase fold protein
cn_combo_scaffold_2283_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23449..23904
DNA (456bp) protein (152aa)
Dihydroxy-acid dehydratase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1II83_9BRAD
LuxA-like protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
LuxA-like protein
Displaying 25 items

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