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cn_combo_scaffold_2636

Alias: RHSP15_4

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2636_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..165
DNA (165bp) protein (55aa)
Ribosome-binding ATPase YchF n=1 Tax=Afipia felis ATCC 53690 RepID=K8NK08_AFIFE
GTP-binding protein YchF; K06942 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
GTP-binding protein
cn_combo_scaffold_2636_2
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

226..1035
DNA (810bp) protein (270aa)
Transcriptional activator ligand binding domain protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XF02_9CHRO
transcriptional regulator, effector-binding domain/component Tax=RBG_13_Chloroflexi_66_10_curated
transcriptional activator ligand binding domain protein
cn_combo_scaffold_2636_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1032..1436
DNA (405bp) protein (135aa)
Endoribonuclease L-PSP n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TSR9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KJC60455.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp
endoribonuclease L-PSP
cn_combo_scaffold_2636_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1467..3398)
DNA (1932bp) protein (644aa)
Tat pathway signal sequence domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A3S5_9PROT
hypothetical protein; K07093 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_2636_5
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3554..4924
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) RepID=Q2RTM2_RHORT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC22523.1}; Flags: Precursor;; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" so
cn_combo_scaffold_2636_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4925..6427)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PM57_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41859.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
hypothetical protein
cn_combo_scaffold_2636_7
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6432..6905)
DNA (474bp) protein (158aa)
Tripartite tricarboxylate transporter TctB family n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WFF6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:BAR56651.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium di
hypothetical protein
cn_combo_scaffold_2636_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6936..7916)
DNA (981bp) protein (327aa)
Bll0954 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89VU1_BRADU
Uncharacterized protein {ECO:0000313|EMBL:ETR76330.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
cn_combo_scaffold_2636_9
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7997..8989)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003687432
Uncharacterized protein {ECO:0000313|EMBL:EKS42620.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC
hypothetical protein
cn_combo_scaffold_2636_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9067..9690)
DNA (624bp) protein (208aa)
FMN-binding negative transcriptional regulator n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BCJ9_MEISD
FMN-binding negative transcriptional regulator; K07734 transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
FMN-binding negative transcriptional regulator
cn_combo_scaffold_2636_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9778..10446
DNA (669bp) protein (223aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Carboxymethylenebutenolidase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DKN1_BRAJP
carboxymethylenebutenolidase
cn_combo_scaffold_2636_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10406..11674
DNA (1269bp) protein (423aa)
CoA-transferase family III protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RN74_9PROT
coA-transferase III family protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
coA-transferase III family protein
cn_combo_scaffold_2636_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11671..12576
DNA (906bp) protein (302aa)
hypothetical protein; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
HpcH/HpaI aldolase/citrate lyase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZW75_9PROT
hypothetical protein
cn_combo_scaffold_2636_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12605..13006)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EJJ9_METSB
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_2636_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13194..13976)
DNA (783bp) protein (261aa)
Putative cytochrome c1 n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A736_9PROT
petC; cytochrome c1; K00413 ubiquinol-cytochrome c reductase cytochrome c1 subunit Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cytochrome c1, heme protein
cn_combo_scaffold_2636_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13982..15217)
DNA (1236bp) protein (412aa)
cytochrome B n=1 Tax=Elioraea tepidiphila RepID=UPI00035E7017
petB; Ubiquinol-cytochrome c reductase, Cytochrome b; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cytochrome B
cn_combo_scaffold_2636_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15262..15828)
DNA (567bp) protein (189aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AP22_AZOBR
petA; Ubiquinol-cytochrome C reductase, iron-sulfur subunit Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ubiquinol-cytochrome C reductase
cn_combo_scaffold_2636_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15982..16440
DNA (459bp) protein (153aa)
spoU; rRNA methylase; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWZ2_9PROT
spoU; rRNA methylase
cn_combo_scaffold_2636_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16437..17360
DNA (924bp) protein (308aa)
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTH0_9PROT
hemF; coproporphyrinogen III oxidase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hemF; coproporphyrinogen III oxidase
cn_combo_scaffold_2636_20
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17486..18490
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLX5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EFH11711.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervica
hypothetical protein
cn_combo_scaffold_2636_21
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18514..19287
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase, EchA5 n=3 Tax=Mycobacterium RepID=B2HSK3_MYCMM
echA5; enoyl-CoA hydratase
Enoyl-CoA hydratase, EchA5 {ECO:0000313|EMBL:ACC39461.1}; TaxID=216594 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (strain AT
cn_combo_scaffold_2636_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19291..20451)
DNA (1161bp) protein (387aa)
ATP-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000345D6BE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ08402.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
cn_combo_scaffold_2636_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20448..20852)
DNA (405bp) protein (135aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_2636_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20849..22060)
DNA (1212bp) protein (404aa)
tRNA nucleotidyltransferase/poly(A) polymerase; K00970 poly(A) polymerase [EC:2.7.7.19] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PREDICTED: CCA tRNA nucleotidyltransferase 1, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C18295
putative tRNA nucleotidyltransferase/poly(A) polymerase
cn_combo_scaffold_2636_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22057..22290)
DNA (234bp) protein (78aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_2636_26
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22309..22935)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JEX8_HYPSM
NUDIX hydrolase domain Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
NUDIX hydrolase domain
cn_combo_scaffold_2636_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23002..24015
DNA (1014bp) protein (338aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036D55CD
ATPase
cn_combo_scaffold_2636_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24047..24946
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036C1693
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_2636_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24950..26182
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KBP7_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
Displaying 29 items

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