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cn_combo_scaffold_3128

Alias: RHSP15_7

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3128_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..446
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z1J6_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_3128_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

443..3907
DNA (3465bp) protein (1155aa)
Helicase, UvrD n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUA7_RHOCS
ATP-dependent exoDNAse beta subunit Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
helicase, UvrD
cn_combo_scaffold_3128_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3993..4310
DNA (318bp) protein (106aa)
Thioredoxin n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U5M1_9PROT
thioredoxin; K03671 thioredoxin 1 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
trxA; thioredoxin 1
cn_combo_scaffold_3128_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4324..5616)
DNA (1293bp) protein (431aa)
folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_
FolC bifunctional protein [Tetrahydrofolate synthase Dihydrofolate synthase] n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6N1_AZOL4
folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase
cn_combo_scaffold_3128_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5624..6514)
DNA (891bp) protein (297aa)
accD; Acetyl-coenzyme A carboxylase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6N2_AZOL4
accD; Acetyl-coenzyme A carboxylase subunit beta
cn_combo_scaffold_3128_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6552..7766)
DNA (1215bp) protein (405aa)
peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00037608DB
cn_combo_scaffold_3128_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7838..8494
DNA (657bp) protein (219aa)
Beta-lactamase domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXU3_PARL1
metallo-beta-lactamase family protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
beta-lactamase domain-containing protein
cn_combo_scaffold_3128_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8505..8882)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI000362B716
Uncharacterized protein {ECO:0000313|EMBL:CDP51836.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
cn_combo_scaffold_3128_9
unknown

Not on your lists

8922..9170
DNA (249bp) protein (83aa)

This feature has no annotations

cn_combo_scaffold_3128_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9122..9955)
DNA (834bp) protein (278aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9S9U1_PHAFV
cn_combo_scaffold_3128_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9955..11169)
DNA (1215bp) protein (405aa)
tryptophan synthase subunit beta; K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IV77_RHOCS
cn_combo_scaffold_3128_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11228..11806)
DNA (579bp) protein (193aa)
Endoribonuclease L-PSP n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4E9_THERP
endoribonuclease L-PSP Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
endoribonuclease L-PSP
cn_combo_scaffold_3128_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11817..12467)
DNA (651bp) protein (217aa)
trpF; N-(5'-phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z621_AZOL4
trpF; N-(5'-phosphoribosyl)anthranilate isomerase
cn_combo_scaffold_3128_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12464..13231)
DNA (768bp) protein (256aa)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AI28_AZOBR
pyrF; orotidine 5'-phosphate decarboxylase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
pyrF; orotidine 5'-phosphate decarboxylase
cn_combo_scaffold_3128_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13270..14754)
DNA (1485bp) protein (495aa)
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=uncultured bacterium B7P37metaSE RepID=C8CIK2_9BACT
glpK; glycerol kinase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_3128_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14769..15788)
DNA (1020bp) protein (340aa)
ispB; octaprenyl diphosphate synthase (EC:2.5.1.1)
Octaprenyl diphosphate synthase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F1A6_9PROT
ispB; octaprenyl diphosphate synthase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_3128_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15855..16580
DNA (726bp) protein (242aa)
O-methyltransferase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A7V6_9PROT
conserved protein of unknown function; methyltransferase domain Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
conserved protein of unknown function; methyltransferase domain
cn_combo_scaffold_3128_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16706..17449
DNA (744bp) protein (248aa)
sohB; proteinase SohB (EC:3.4.-.-) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
sohB; proteinase SohB (EC:3.4.-.-)
Proteinase SohB, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INH4_RHOCS
cn_combo_scaffold_3128_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17460..17927
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XD15_9BURK
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ketosteroid isomerase
cn_combo_scaffold_3128_20
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17924..18205)
DNA (282bp) protein (94aa)
Quaternary ammonium compound-resistance protein SugE n=2 Tax=Oligotropha carboxidovorans RepID=B6JH87_OLICO
sugE; quaternary ammonium compound-resistance protein SugE
Quaternary ammonium compound-resistance protein SugE {ECO:0000313|EMBL:AEI06369.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;"
Displaying 20 items

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