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cn_combo_scaffold_3263

Alias: RHSP15_8

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3263_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32..1030
DNA (999bp) protein (333aa)
Inner membrane protein oxaA n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6J5_9PROT
inner membrane protein translocase component YidC; K03217 preprotein translocase subunit YidC Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
oaxA; Inner membrane protein oxaA
cn_combo_scaffold_3263_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1021..1872
DNA (852bp) protein (284aa)
Membrane protein insertase YidC n=1 Tax=Oceanibaculum indicum P24 RepID=K2JS69_9PROT
membrane protein insertase, YidC/Oxa1 family domain containing protein; K03217 preprotein translocase subunit YidC Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
membrane protein insertase, YidC/Oxa1 family domain containing protein
cn_combo_scaffold_3263_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1872..2537
DNA (666bp) protein (222aa)
Probable GTP-binding protein EngB n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HKS1_GLUDA
engB; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
engB; ribosome biogenesis GTP-binding protein YsxC
cn_combo_scaffold_3263_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2544..3215)
DNA (672bp) protein (224aa)
Prolyl 4-hydroxylase, alpha subunit n=2 Tax=Burkholderia multivorans RepID=B9BRA5_9BURK
hypothetical protein; K09990 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
oxygenase, catalysing oxidative methylation of damaged DNA family protein
cn_combo_scaffold_3263_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3346..4260
DNA (915bp) protein (305aa)
acetylglutamate kinase; K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Acetylglutamate kinase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z336_AZOL4
argB; acetylglutamate kinase
cn_combo_scaffold_3263_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4298..4867
DNA (570bp) protein (190aa)
Peptide deformylase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WAS8_MAGSA
N-formylmethionyl-tRNA deformylase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
N-formylmethionyl-tRNA deformylase
cn_combo_scaffold_3263_7
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4912..5730)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003815123
putative metallophosphodiesterase
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase
cn_combo_scaffold_3263_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5742..6788)
DNA (1047bp) protein (349aa)
Iron ABC transporter, ATP-binding component n=1 Tax=Oceanibaculum indicum P24 RepID=K2KN51_9PROT
Iron ABC transporter, ATP-binding component {ECO:0000313|EMBL:EKE78965.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" s
potA; spermidine/putrescine transport system ATP-binding protein
cn_combo_scaffold_3263_9
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6785..7591)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI0003693B97
putative ABC transporter,permease component rbh
Tax=BJP_IG2103_Rhodocyclales_63_50
cn_combo_scaffold_3263_10
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7607..8425)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000365576F
ABC transporter permease
Tax=BJP_IG2103_Rhodocyclales_63_50
cn_combo_scaffold_3263_11
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8503..9513)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000360E106
potD; spermidine/putrescine transport system substrate-binding protein
Tax=BJP_IG2103_Rhodocyclales_63_50
cn_combo_scaffold_3263_12
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9518..10327)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037DD8B9
DeoR family transcriptional regulator
Tax=BJP_IG2103_Rhodocyclales_63_50
cn_combo_scaffold_3263_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10472..11836)
DNA (1365bp) protein (455aa)
Oxidoreductase domain protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CSY3_VARPS
oxidoreductase domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
oxidoreductase domain-containing protein
cn_combo_scaffold_3263_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11859..12659)
DNA (801bp) protein (267aa)
phytanoyl-CoA dioxygenase; K10674 ectoine hydroxylase [EC:1.14.11.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K6W1_9PROT
phytanoyl-CoA dioxygenase
cn_combo_scaffold_3263_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12695..13366)
DNA (672bp) protein (224aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2T027_9BURK
GntR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative transcriptional regulatory protein, GntR family
cn_combo_scaffold_3263_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13407..14168)
DNA (762bp) protein (254aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00038278E1
glycerophosphoryl diester phosphodiesterase
cn_combo_scaffold_3263_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14317..15285)
DNA (969bp) protein (323aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Protease HtpX n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BSG8_9GAMM
HtpX-2 peptidase
cn_combo_scaffold_3263_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15314..15868)
DNA (555bp) protein (185aa)
cytoplasmic membrane protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
LemA family protein id=4143265 bin=GWC2_Proteo_65_14_Ab886 species=Thermosipho africanus genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
LemA family protein
cn_combo_scaffold_3263_19
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15946..16413
DNA (468bp) protein (156aa)
polyketide cyclase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036D8D96
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_3263_20
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16421..17260)
DNA (840bp) protein (280aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; K00674 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase [EC:2.3.1.117] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JZN4_9PROT
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
cn_combo_scaffold_3263_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17336..17815
DNA (480bp) protein (160aa)
NUDIX hydrolase; K08310 dATP pyrophosphohydrolase [EC:3.6.1.-] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
NUDIX hydrolase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MRX2_9BURK
ntpA; dATP pyrophosphohydrolase
cn_combo_scaffold_3263_22
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17812..18528
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P246_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34764.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
major facilitator superfamily protein
Displaying 22 items

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