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cn_combo_scaffold_3945

Alias: RHSP15_15

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3945_1
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..2206
-----------------
DNA (2205bp)
protein (735aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036E8716
conserved membrane protein of unknown function Tax=RBG_16_Betaproteobacteria_66_20_curated
ABC transporter, ATP-binding/permease protein
cn_combo_scaffold_3945_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2225..2677
-----------------
DNA (453bp)
protein (151aa)
cyclic nucleotide-binding protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037F2361
transcriptional regulator protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
transcriptional regulator
cn_combo_scaffold_3945_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2687..3175
-----------------
DNA (489bp)
protein (163aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TGH3_TISMK
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
conserved protein of unknown function
cn_combo_scaffold_3945_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3189..3431)
-----------------
DNA (243bp)
protein (81aa)
Transglycosylase-associated protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VJX6_POLNA
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
transglycosylase-associated protein
cn_combo_scaffold_3945_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3454..4275)
-----------------
DNA (822bp)
protein (274aa)
Exodeoxyribonuclease III (EC:3.1.11.2) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
exodeoxyribonuclease III family protein (EC:3.1.11.2)
Exodeoxyribonuclease III n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R186_9RHIZ
cn_combo_scaffold_3945_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4341..5285
-----------------
DNA (945bp)
protein (315aa)
Putative neutral zinc metallopeptidase n=1 Tax=Azoarcus sp. KH32C RepID=H0PVN1_9RHOO
hypothetical protein; K07054 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative neutral zinc metallopeptidase
cn_combo_scaffold_3945_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5289..5990)
-----------------
DNA (702bp)
protein (234aa)
Putative fumarylacetoacetate hydrolase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGC0_AZOBR
putative fumarylpyruvate hydrolase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative fumarylacetoacetate hydrolase
cn_combo_scaffold_3945_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6043..6654
-----------------
DNA (612bp)
protein (204aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003630BD1
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_3945_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6655..7764)
-----------------
DNA (1110bp)
protein (370aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVK1_RHOCS
hrcA; heat-inducible transcription repressor; K03705 heat-inducible transcriptional repressor Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hrcA; heat-inducible transcription repressor
cn_combo_scaffold_3945_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7851..8570
-----------------
DNA (720bp)
protein (240aa)
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4TUC5_9PROT
cn_combo_scaffold_3945_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8570..9184
-----------------
DNA (615bp)
protein (205aa)
nucleoside-triphosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
rdgB; nucleoside-triphosphatase RdgB (EC:3.6.1.15)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI000376988C
cn_combo_scaffold_3945_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9181..10347
-----------------
DNA (1167bp)
protein (389aa)
Putative oxygen-independent coproporphyrinogen III oxidase (HemN-like) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AGG2_AZOBR
putative oxygen-independent coproporphyrinogen III oxidase (hemN-like) Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
coproporphyrinogen III oxidase
cn_combo_scaffold_3945_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10344..11216
-----------------
DNA (873bp)
protein (291aa)
amino acid ABC transporter n=1 Tax=Xanthobacteraceae RepID=UPI00037E3A8D
family 3 extracellular solute-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
family 3 extracellular solute-binding protein
cn_combo_scaffold_3945_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11272..11649)
-----------------
DNA (378bp)
protein (126aa)
Hemimethylated DNA binding protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T8J4_CAUSK
Hemimethylated DNA binding protein; K11940 heat shock protein HspQ Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hemimethylated DNA-binding protein
cn_combo_scaffold_3945_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11883..12731
-----------------
DNA (849bp)
protein (283aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K6Q8_9PROT
metallo-beta-lactamase superfamily Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
metallo-beta-lactamase superfamily
cn_combo_scaffold_3945_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12742..13578
-----------------
DNA (837bp)
protein (279aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TR78_TISMK
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_3945_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13589..14788
-----------------
DNA (1200bp)
protein (400aa)
Adenylate cyclase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KM30_9PROT
adenylate/guanylate cyclase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cyaA; adenylate cyclase, family 3
Displaying 17 items

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