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cn_combo_scaffold_4062

Alias: RHSP15_20

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4062_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1018)
-----------------
DNA (1017bp)
protein (339aa)
alpha-isopropylmalate/homocitrate synthase family transferase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
2-isopropylmalate synthase n=1 Tax=Azospirillum amazonense Y2 RepID=G1XZF7_9PROT
putative alpha-isopropylmalate/homocitrate synthase family transferase
cn_combo_scaffold_4062_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1063..2181
-----------------
DNA (1119bp)
protein (373aa)
Putative racemase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQ08_9PROT
mandelate racemase / L-alanine-DL-glutamate epimerase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Mandelate racemase/muconate lactonizing enzyme
cn_combo_scaffold_4062_3
unknown

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comp(2171..2935)
-----------------
DNA (765bp)
protein (255aa)
Type 12 methyltransferase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MZ20_9RHIZ
Type 12 methyltransferase {ECO:0000313|EMBL:CPR15545.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp
type 12 methyltransferase
cn_combo_scaffold_4062_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2932..3792)
-----------------
DNA (861bp)
protein (287aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2IZ05_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_4062_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3796..4875)
-----------------
DNA (1080bp)
protein (360aa)
Peptidase, M48 family n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSQ5_GRABC
peptidase M48 family protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Peptidase, M48 family protein
cn_combo_scaffold_4062_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4878..5918)
-----------------
DNA (1041bp)
protein (347aa)
Hypothetical membrane spanning protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BSQ4_GRABC
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Putative membrane spanning protein
cn_combo_scaffold_4062_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6195..8219
-----------------
DNA (2025bp)
protein (675aa)
methylmalonyl-CoA mutase (EC:5.4.99.2); K14447 (2R)-ethylmalonyl-CoA mutase Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Methylmalonyl-CoA mutase, large subunit n=2 Tax=Rhodospirillum rubrum RepID=G2TA33_RHORU
methylmalonyl-CoA mutase large subunit
cn_combo_scaffold_4062_8
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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8309..8743
-----------------
DNA (435bp)
protein (145aa)
peptidoglycan-binding protein LysM n=1 Tax=Lamprocystis purpurea RepID=UPI00035F67C0
Transport-associated protein {ECO:0000313|EMBL:EGV19205.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811
LysM domain/BON superfamily protein
cn_combo_scaffold_4062_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8753..9130)
-----------------
DNA (378bp)
protein (126aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_4062_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9161..10036
-----------------
DNA (876bp)
protein (292aa)
NTP pyrophosphohydrolase n=1 Tax=Thalassospira lucentensis RepID=UPI0003B68904
NTP pyrophosphohydrolase including oxidative damage repair enzyme Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
NTP pyrophosphohydrolase including oxidative damage repair enzyme
cn_combo_scaffold_4062_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10107..10496
-----------------
DNA (390bp)
protein (130aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_4062_12
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10520..11500)
-----------------
DNA (981bp)
protein (327aa)
Extra-cytoplasmic solute receptor family protein 162 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HID9_ACHXA
extra-cytoplasmic solute receptor family protein 162
Extra-cytoplasmic solute receptor family protein 162 {ECO:0000313|EMBL:ADP19132.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;
cn_combo_scaffold_4062_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11585..12994
-----------------
DNA (1410bp)
protein (470aa)
Tetratricopeptide repeat protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TP98_TISMK
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_4062_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12991..14391
-----------------
DNA (1401bp)
protein (467aa)
Amidase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JW65_9PROT
gatA; glutamyl-tRNA(Gln) amidotransferase subunit A Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCBAC17F8.16; amidase
Displaying 14 items

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