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cn_combo_scaffold_5266

Alias: RHSP15_35

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5266_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..188)
DNA (186bp) protein (62aa)
Integration host factor subunit beta n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZUX1_9PROT
nucleoid DNA-binding protein; K05788 integration host factor subunit beta Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
nucleoid DNA-binding protein
cn_combo_scaffold_5266_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(346..2070)
DNA (1725bp) protein (575aa)
30S ribosomal protein S1 n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NRA2_AZOS1
rpsA; 30S ribosomal subunit protein S1 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
rpsA; 30S ribosomal protein S1
cn_combo_scaffold_5266_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2221..2853)
DNA (633bp) protein (211aa)
cmk; cytidine monophosphate (CMP) kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cmk; Cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase) (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6P6_9PROT
cn_combo_scaffold_5266_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2850..4295)
DNA (1446bp) protein (482aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=AROA_MAGSA
3-phosphoshikimate 1-carboxyvinyltransferase
cn_combo_scaffold_5266_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4357..4722
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B2EF3F
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_5266_trna_1
unknown

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4795..4867
DNA (73bp)
transferRNA
cn_combo_scaffold_5266_6
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5402..6211)
DNA (810bp) protein (270aa)
Peptidase family M48 n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YZB7_9GAMM
Peptidase family M48 {ECO:0000313|EMBL:EIC22044.1}; Flags: Precursor;; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thio
peptidase M48
cn_combo_scaffold_5266_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6496..6966
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CSR0_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS20017.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Var
cn_combo_scaffold_5266_8
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6989..8350)
DNA (1362bp) protein (454aa)
UbiD family decarboxylase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8B4_STAND
UbiD family decarboxylase
UbiD family decarboxylase {ECO:0000313|EMBL:ADH88587.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (stra
cn_combo_scaffold_5266_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8389..9408
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8B5_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH88588.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain
cn_combo_scaffold_5266_10
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9443..9823)
DNA (381bp) protein (127aa)
Putative Copper resistance protein, copC family n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SMA2_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_5266_11
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9823..10434)
DNA (612bp) protein (204aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacter
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8B8_STAND
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
cn_combo_scaffold_5266_12
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10443..11210)
DNA (768bp) protein (256aa)
UbiD family decarboxylase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8B7_STAND
UbiD family decarboxylase
UbiD family decarboxylase {ECO:0000313|EMBL:ADH88590.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (stra
Displaying 13 items

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