ggKbase home page

cn_combo_scaffold_5396

Alias: RHSP15_37

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5396_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15..839)
-----------------
DNA (825bp)
protein (275aa)
ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89CH4_BRADU
high-affinity branched-chain amino acid transport protein, ABC superfamily, ATP-binding Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
ABC transporter ATP-binding protein
cn_combo_scaffold_5396_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1371..2186
-----------------
DNA (816bp)
protein (272aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_5396_3
Acetobacter sp. CAG:977, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2235..4058)
-----------------
DNA (1824bp)
protein (608aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Acetobacter sp. CAG:977 RepID=R5Q358_9PROT
cn_combo_scaffold_5396_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4086..5444)
-----------------
DNA (1359bp)
protein (453aa)
glmU; UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157 2.7.7.23); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.
glmU; UDP-N-acetylglucosamine pyrophosphorylase (EC:2.3.1.157 2.7.7.23)
Bifunctional protein GlmU n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INA0_RHOCS
cn_combo_scaffold_5396_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5505..6206
-----------------
DNA (702bp)
protein (234aa)
gph; phosphoglycolate phosphatase (EC:3.1.3.18); K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
gph; phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NZM5_AZOS1
cn_combo_scaffold_5396_trna_1
unknown

Not on your lists

6243..6314
-----------------
DNA (72bp)
transferRNA
cn_combo_scaffold_5396_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6385..7437
-----------------
DNA (1053bp)
protein (351aa)
hypothetical protein n=1 Tax=Thalassospira lucentensis RepID=UPI0003B7701A
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
cn_combo_scaffold_5396_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7449..8324)
-----------------
DNA (876bp)
protein (292aa)
Taurine catabolism dioxygenase tauD/tfdA n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UGA6_ADVKW
taurine catabolism dioxygenase tauD/tfdA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
taurine catabolism dioxygenase tauD/tfdA
cn_combo_scaffold_5396_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8521..9537)
-----------------
DNA (1017bp)
protein (339aa)
Putative alpha-ketoglutarate-dependent taurine dioxygenase oxidoreductase protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TVS9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:ETX02790.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
dioxygenase
cn_combo_scaffold_5396_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9534..10988)
-----------------
DNA (1455bp)
protein (485aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K7L9_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
Displaying 10 items

View Taxonomy