ggKbase home page

cn_combo_scaffold_5985

Alias: RHSP15_43

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5985_1
Bordetella holmesii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..469
-----------------
DNA (468bp)
protein (156aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Bordetella holmesii RepID=M5NJB5_9BORD
dapA; dihydrodipicolinate synthase
cn_combo_scaffold_5985_2
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

481..1704
-----------------
DNA (1224bp)
protein (408aa)
Arabinose efflux permease family protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSX0_9BRAD
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIG62876.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="B
MFS transporter
cn_combo_scaffold_5985_3
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1706..2464
-----------------
DNA (759bp)
protein (253aa)
Putative serine/threonine protein phosphatase {ECO:0000313|EMBL:CCD01153.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CCD01153.1};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospir
Putative serine/threonine protein phosphatase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8API0_AZOBR
putative serine/threonine protein phosphatase
cn_combo_scaffold_5985_4
unknown

Not on your lists

comp(2570..2968)
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

cn_combo_scaffold_5985_5
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2955..3122)
-----------------
DNA (168bp)
protein (56aa)
Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WW39_OCHA4
Cbb3-type cytochrome oxidase maturation protein {ECO:0000313|EMBL:GAK46453.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
cbb3-type cytochrome oxidase maturation protein
cn_combo_scaffold_5985_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3119..5338)
-----------------
DNA (2220bp)
protein (740aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036F2A2B
ATPase P
ATPase P {ECO:0000313|EMBL:AIB10446.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
cn_combo_scaffold_5985_7
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5335..5832)
-----------------
DNA (498bp)
protein (166aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036887FF
nitrogen fixation protein fixH
Nitrogen fixation protein fixH {ECO:0000313|EMBL:AFK54122.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella
cn_combo_scaffold_5985_8
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5829..7274)
-----------------
DNA (1446bp)
protein (482aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003824519
fixG; cytochrome c oxidase accessory protein CcoG rbh
Cytochrome c oxidase accessory protein CcoG {ECO:0000313|EMBL:AFK54121.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" sourc
cn_combo_scaffold_5985_9
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7274..8143)
-----------------
DNA (870bp)
protein (290aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMY2_TISMK
petJ; cytochrome-c oxidase subunit FixP
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="
cn_combo_scaffold_5985_10
unknown

Not on your lists

comp(8140..8298)
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

cn_combo_scaffold_5985_11
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8302..9042)
-----------------
DNA (741bp)
protein (247aa)
FixO1 cytochrome C oxidase subunit n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMY0_TISMK
FixO1 cytochrome C oxidase subunit
FixO1 cytochrome C oxidase subunit {ECO:0000313|EMBL:AFK54118.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistre
cn_combo_scaffold_5985_12
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9082..10011)
-----------------
DNA (930bp)
protein (310aa)
Cbb3-type cytochrome c oxidase subunit I n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMX9_TISMK
fixN; cbb3-type cytochrome c oxidase subunit I
Cbb3-type cytochrome c oxidase subunit I {ECO:0000313|EMBL:AFK54117.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="
Displaying 12 items

View Taxonomy