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cn_combo_scaffold_6287

Alias: RHSP15_49

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_6287_1
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..218
-----------------
DNA (216bp)
protein (72aa)
CBP3 protein, mitochondrial precursor Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
cn_combo_scaffold_6287_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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228..812
-----------------
DNA (585bp)
protein (195aa)
Uncharacterized protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2M8L6_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_6287_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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936..1130
-----------------
DNA (195bp)
protein (65aa)
50S ribosomal protein L32 n=2 Tax=Azospirillum lipoferum RepID=D3NTD1_AZOS1
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
rpmF; 50S ribosomal protein L32
cn_combo_scaffold_6287_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1182..2252
-----------------
DNA (1071bp)
protein (357aa)
plsX; putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Phosphate acyltransferase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=PLSX_RHOCS
plsX; putative glycerol-3-phosphate acyltransferase PlsX
cn_combo_scaffold_6287_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2249..3220
-----------------
DNA (972bp)
protein (324aa)
fabH; 3-oxoacyl-ACP synthase (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
3-oxoacyl-(acyl carrier protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0K9_9PROT
cn_combo_scaffold_6287_6
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3363..3674
-----------------
DNA (312bp)
protein (104aa)
Integration host factor subunit alpha n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMR4_AZOBR
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1385369 species="Bacteria; Proteobacte
ihfA; integration host factor alpha-subunit (IHF-alpha)
cn_combo_scaffold_6287_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3700..4230
-----------------
DNA (531bp)
protein (177aa)
Transcriptional regulator, MerR family protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMR3_RHOCS
transcriptional regulator, MerR family protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
transcriptional regulator, MerR family protein
cn_combo_scaffold_6287_8
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4419..4724
-----------------
DNA (306bp)
protein (102aa)
Outer-membrane lipoprotein LolB n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MMW6_9PROT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
outer-membrane lipoprotein LolB
cn_combo_scaffold_6287_9
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4687..5907)
-----------------
DNA (1221bp)
protein (407aa)
Tetracycline resistance protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89MY8_BRADU
MFS transporter {ECO:0000313|EMBL:KFA88393.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacte
tetA; tetracycline resistance protein
cn_combo_scaffold_6287_10
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6109..6792)
-----------------
DNA (684bp)
protein (228aa)
integrase n=1 Tax=Rhizobium meliloti RepID=UPI00037BF91E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ17442.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;
cn_combo_scaffold_6287_11
unknown

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6797..7057
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

cn_combo_scaffold_6287_12
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7269..7889)
-----------------
DNA (621bp)
protein (207aa)
Peptidoglycan-associated protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TX52_9RHOB
OmpA/MotB domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
putative outer membrane protein
cn_combo_scaffold_6287_13
unknown

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8148..8345
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

cn_combo_scaffold_6287_14
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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8348..8638
-----------------
DNA (291bp)
protein (97aa)
hypothetical protein Tax=RBG_16_Gammaproteobacteria_62_13__curated
cn_combo_scaffold_6287_trna_1
unknown

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comp(8522..8595)
-----------------
DNA (74bp)
transferRNA
cn_combo_scaffold_6287_15
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8703..9593
-----------------
DNA (891bp)
protein (297aa)
Putative permease of the major facilitator superfamily MFS-1 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AL73_AZOBR
putative permease of the major facilitator superfamily MFS-1
Putative permease of the major facilitator superfamily MFS-1 {ECO:0000313|EMBL:CCC97985.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; A
Displaying 16 items

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