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cn_combo_scaffold_4612

Alias: SPHB9_2

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_4612_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..484)
DNA (483bp) protein (161aa)
Resolvase helix-turn-helix domain protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCJ0_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP74212.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
cn_combo_scaffold_4612_2
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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590..1054
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A747
Uncharacterized protein {ECO:0000313|EMBL:KCZ47276.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54
hypothetical protein
cn_combo_scaffold_4612_3
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1051..1875)
DNA (825bp) protein (275aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRU7_9SPHN
rsmA; ribosomal RNA small subunit methyltransferase A
cn_combo_scaffold_4612_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1881..2879)
DNA (999bp) protein (333aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRU8_9SPHN
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase rbh
cn_combo_scaffold_4612_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2914..4287)
DNA (1374bp) protein (458aa)
Chaperone SurA {ECO:0000256|SAAS:SAAS00043023}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
Putative peptidyl-prolyl cis-trans isomerase SurA n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRU9_9SPHN
surA; putative peptidyl-prolyl cis-trans isomerase SurA rbh
cn_combo_scaffold_4612_6
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4411..6735)
DNA (2325bp) protein (775aa)
Putative organic solvent tolerance protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRV0_9SPHN
putative organic solvent tolerance protein rbh
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sp
cn_combo_scaffold_4612_7
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6930..8384
DNA (1455bp) protein (485aa)
Probable cytosol aminopeptidase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRV1_9SPHN
pepA; aminopeptidase
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=627192 speci
cn_combo_scaffold_4612_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8420..8857
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRV2_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66168.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
cn_combo_scaffold_4612_9
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8975..9397
DNA (423bp) protein (141aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
ndk; nucleoside diphosphate kinase (EC:2.7.4.6)
UPI0003CFD44D related cluster n=1 Tax=unknown RepID=UPI0003CFD44D
cn_combo_scaffold_4612_10
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9536..11062
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039BFB14
xylose ABC transporter Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
sugar ABC transporter
cn_combo_scaffold_4612_11
Sphingomonas sp. BHC-A, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11197..11877
DNA (681bp) protein (227aa)
Putative chemotaxis transducer n=1 Tax=Sphingobium indicum B90A RepID=I5BF37_9SPHN
Chemotaxis protein {ECO:0000313|EMBL:KEY97735.1}; TaxID=322611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. BHC
putative chemotaxis transducer
cn_combo_scaffold_4612_12
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11893..12750)
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II27_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66950.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
Displaying 12 items

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