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cn_combo_scaffold_6603

Alias: SPHB9_15

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_6603_1
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..189)
DNA (189bp) protein (63aa)
HAD family hydrolase n=1 Tax=Sphingobium baderi LL03 RepID=T0GMX8_9SPHN
HAD family hydrolase {ECO:0000313|EMBL:EQB01373.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi
phosphoglycolate phosphatase
cn_combo_scaffold_6603_2
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(211..702)
DNA (492bp) protein (164aa)
MerR family transcriptional regulator n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QBR5_RALPI
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:AGW88414.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralsto
cn_combo_scaffold_6603_3
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

781..1614
DNA (834bp) protein (278aa)
Methyltransferase n=1 Tax=Thauera phenylacetica B4P RepID=N6ZXN8_9RHOO
SAM-dependent methyltransferase {ECO:0000313|EMBL:KJK13041.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacter
ubiE3; methyltransferase
cn_combo_scaffold_6603_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1633..2499)
DNA (867bp) protein (289aa)
Protocatechuate 4,5-dioxygenase beta chain {ECO:0000313|EMBL:BAK64855.1}; EC=1.13.11.8 {ECO:0000313|EMBL:BAK64855.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonad
Protocatechuate 4,5-dioxygenase beta chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJI5_9SPHN
protocatechuate 4,5-dioxygenase subunit beta
cn_combo_scaffold_6603_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2501..2902)
DNA (402bp) protein (134aa)
Protocatechuate 4,5-dioxygenase alpha chain {ECO:0000313|EMBL:BAK64854.1}; EC=1.13.11.8 {ECO:0000313|EMBL:BAK64854.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomona
Protocatechuate 4,5-dioxygenase alpha chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJI4_9SPHN
protocatechuate 4,5-dioxygenase subunit alpha
cn_combo_scaffold_6603_6
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3059..3661)
DNA (603bp) protein (201aa)
negative transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA16B
negative transcriptional regulator
Negative transcriptional regulator {ECO:0000313|EMBL:KFG89687.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphi
cn_combo_scaffold_6603_7
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3661..4926)
DNA (1266bp) protein (422aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
Pseudouridine synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKM1_9SPHN
pseudouridine synthase rbh
cn_combo_scaffold_6603_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4923..5309)
DNA (387bp) protein (129aa)
Putative fluoride ion transporter CrcB n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKM0_9SPHN
protein CrcB-like protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sourc
cn_combo_scaffold_6603_9
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5364..5759)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKL9_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65082.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
cn_combo_scaffold_6603_10
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6112..7125)
DNA (1014bp) protein (338aa)
RNA polymerase sigma factor RpoH n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKL7_9SPHN
rpoH; RNA polymerase sigma-32 factor rbh
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteri
cn_combo_scaffold_6603_11
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7088..7987)
DNA (900bp) protein (300aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
Pseudouridine synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKL6_9SPHN
rluD; ribosomal large subunit pseudouridine synthase D
cn_combo_scaffold_6603_12
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8058..8510
DNA (453bp) protein (151aa)
Peptidase M67 family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKL5_9SPHN
peptidase M67 family protein
Peptidase M67 family protein {ECO:0000313|EMBL:BAK65078.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
cn_combo_scaffold_6603_13
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8547..9185
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKL4_9SPHN
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65077.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
Displaying 13 items

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