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cn_combo_scaffold_11049

Alias: SPHB9_85

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_11049_1
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6..431)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00030C4FF3
UPF0260 protein HMPREF9718_02081 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph
hypothetical protein
cn_combo_scaffold_11049_2
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(435..1073)
DNA (639bp) protein (213aa)
electron transporter n=1 Tax=Sphingobium xenophagum RepID=UPI0002E1B466
electron transport protein SCO1/SenC; K07152 Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
sco1; hypothetical protein
cn_combo_scaffold_11049_3
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1097..1756
DNA (660bp) protein (220aa)
ankyrin n=1 Tax=Sphingobium xenophagum RepID=UPI0003738358
Ankyrin {ECO:0000313|EMBL:EQB06099.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;
ankyrin repeat protein rbh
cn_combo_scaffold_11049_4
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1770..2264)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000360E253
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
hypothetical protein
cn_combo_scaffold_11049_5
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2376..3047)
DNA (672bp) protein (224aa)
hydrolase n=1 Tax=Sphingobium xenophagum RepID=UPI00037771F0
Cell wall hydrolyses involved in spore germination {ECO:0000313|EMBL:CCW20182.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium
cell wall hydrolase SleB rbh
cn_combo_scaffold_11049_6
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3225..3578)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036DCE5B
Uncharacterized protein {ECO:0000313|EMBL:CCW20183.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
hypothetical protein
cn_combo_scaffold_11049_7
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3568..4038)
DNA (471bp) protein (157aa)
thioesterase n=1 Tax=Sphingobium xenophagum RepID=UPI000375022F
Uncharacterized protein, possibly involved in aromatic compounds catabolism {ECO:0000313|EMBL:CCW20184.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphin
phenylacetic acid degradation-like protein
cn_combo_scaffold_11049_8
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4025..4492)
DNA (468bp) protein (156aa)
nitrogen regulatory protein n=1 Tax=Sphingobium xenophagum RepID=UPI000307A853
PTS system nitrogen-specific IIA component, PtsN {ECO:0000313|EMBL:CCW20185.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;
ptsN; PTS system nitrogen regulatory IIA component
cn_combo_scaffold_11049_9
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4623..5228)
DNA (606bp) protein (202aa)
30S ribosomal protein S30 n=1 Tax=Sphingobium xenophagum RepID=UPI00030237EB
Ribosomal subunit interface protein {ECO:0000313|EMBL:CCW20187.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sph
rpoN; sigma 54
cn_combo_scaffold_11049_10
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5304..5747)
DNA (444bp) protein (148aa)
DNA polymerase III epsilon subunit {ECO:0000313|EMBL:CCW20188.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CCW20188.1};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sph
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III subunit epsilon n=1 Tax=Sphingobium xenophagum RepID=UPI000304A880
Displaying 10 items

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