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cn_combo_scaffold_12023

Alias: SPHB9_106

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_12023_1
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..113
DNA (111bp) protein (37aa)
hypothetical protein n=2 Tax=Sphingobium xenophagum RepID=UPI0002E258FD
Glyoxalase family protein {ECO:0000313|EMBL:CCW18379.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium j
hypothetical protein
cn_combo_scaffold_12023_2
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137..670
DNA (534bp) protein (178aa)
peroxiredoxin n=2 Tax=Sphingobium xenophagum RepID=UPI000373EB4A
Alkyl hydroperoxide reductase subunit C-like protein {ECO:0000313|EMBL:CCW18380.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobi
peroxiredoxin rbh
cn_combo_scaffold_12023_3
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(773..1162)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002F1E345
Uncharacterized protein {ECO:0000313|EMBL:CCW18381.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
hypothetical protein
cn_combo_scaffold_12023_4
unknown

Not on your lists

1357..1461
DNA (105bp) protein (35aa)

This feature has no annotations

cn_combo_scaffold_12023_5
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1503..1688
DNA (186bp) protein (62aa)
stress-responsive transcriptional regulator n=1 Tax=Sphingobium xenophagum RepID=UPI0002FB3732
Putative stress-responsive transcriptional regulator {ECO:0000313|EMBL:CCW18383.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobi
pspC; phage shock protein C
cn_combo_scaffold_12023_6
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2013..2750)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002DE57C1
Uncharacterized protein {ECO:0000313|EMBL:CCW18384.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
hypothetical protein rbh
cn_combo_scaffold_12023_7
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2785..3456)
DNA (672bp) protein (224aa)
Peptidyl-prolyl cis-trans isomerase ppiA {ECO:0000313|EMBL:CCW18385.1}; EC=5.2.1.8 {ECO:0000313|EMBL:CCW18385.1};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
peptidylprolyl isomerase n=1 Tax=Sphingobium xenophagum RepID=UPI0002F971F0
cyclophilin type peptidyl-prolyl cis-trans isomerase
cn_combo_scaffold_12023_trna_1
unknown

Not on your lists

comp(3578..3650)
DNA (73bp)
transferRNA
cn_combo_scaffold_12023_8
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3699..3893)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00030B8816
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
hypothetical protein
cn_combo_scaffold_12023_9
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3883..4872)
DNA (990bp) protein (330aa)
ribonuclease n=1 Tax=Sphingobium xenophagum RepID=UPI0002F111A7
Ribonuclease {ECO:0000313|EMBL:CCW18387.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD3
putative ribonuclease
cn_combo_scaffold_12023_10
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4881..5150)
DNA (270bp) protein (90aa)
septum formation protein Maf n=1 Tax=Sphingobium xenophagum RepID=UPI000317795C
Maf-like protein BF95_20125 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
maf; septum formation protein
cn_combo_scaffold_12023_11
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5454..5672)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Sphingobium sp. HDIP04 RepID=T0IIG6_9SPHN
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
cn_combo_scaffold_12023_12
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5736..6539)
DNA (804bp) protein (268aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:CCW17823.1}; EC=2.6.1.62 {ECO:0000313|EMBL:CCW17823.1};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacter
bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Sphingobium xenophagum RepID=UPI0002F20E60
Displaying 13 items

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