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cn_combo_scaffold_1409

Alias: SPHP32_189

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1409_1
unknown

Not on your lists

3..146
DNA (144bp) protein (48aa)

This feature has no annotations

cn_combo_scaffold_1409_2
Sphingomonas sp. BHC-A, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195..629
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002631092
Uncharacterized protein {ECO:0000313|EMBL:KEZ00112.1}; TaxID=322611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
cn_combo_scaffold_1409_3
unknown

Not on your lists

626..1036
DNA (411bp) protein (137aa)

This feature has no annotations

cn_combo_scaffold_1409_4
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1036..1359
DNA (324bp) protein (108aa)
Putative uncharacterized protein gp19 n=1 Tax=EBPR siphovirus 5 RepID=F8TVE5_9CAUD
Anaerobic benzoate catabolism transcriptional regulator {ECO:0000313|EMBL:EZP74410.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingom
cn_combo_scaffold_1409_5

Not on your lists

1352..1549
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK49368.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cn_combo_scaffold_1409_6
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1542..2612
DNA (1071bp) protein (357aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas putida S16 RepID=F8G5I2_PSEPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ12998.1}; TaxID=1042876 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putid
cn_combo_scaffold_1409_7
unknown

Not on your lists

2881..3243
DNA (363bp) protein (121aa)

This feature has no annotations

cn_combo_scaffold_1409_8
unknown

Not on your lists

3240..3908
DNA (669bp) protein (223aa)

This feature has no annotations

cn_combo_scaffold_1409_9
unknown

Not on your lists

3908..4090
DNA (183bp) protein (61aa)

This feature has no annotations

cn_combo_scaffold_1409_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4171..4413
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW13_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82630.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_1409_11
unknown

Not on your lists

4413..4640
DNA (228bp) protein (76aa)

This feature has no annotations

cn_combo_scaffold_1409_12
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4640..4846
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HIW2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ60687.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
cn_combo_scaffold_1409_13
unknown

Not on your lists

4916..5212
DNA (297bp) protein (99aa)

This feature has no annotations

cn_combo_scaffold_1409_14
Sphingomonas sp. BHC-A, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5199..6548
DNA (1350bp) protein (450aa)
Site-specific recombinase, phage integrase family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZZZ3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KEZ00121.1}; TaxID=322611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
cn_combo_scaffold_1409_15
unknown

Not on your lists

6545..6850
DNA (306bp) protein (102aa)

This feature has no annotations

cn_combo_scaffold_1409_trna_1
unknown

Not on your lists

6931..7001
DNA (71bp)
transferRNA
cn_combo_scaffold_1409_16
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7091..9358)
DNA (2268bp) protein (756aa)
CbbBc protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HH16_9SPHN
CbbBc protein {ECO:0000313|EMBL:EQB11423.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens D
formate dehydrogenase subunit alpha
cn_combo_scaffold_1409_17
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9521..10327
DNA (807bp) protein (269aa)
Protein FdhD homolog n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GWR0_SPHAL
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphing
fdhD; FdhD-like protein
cn_combo_scaffold_1409_18
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10349..11683)
DNA (1335bp) protein (445aa)
Putative two-component histidine kinase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNR0_9SPHN
two component sensor histidine kinase Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
two component sensor histidine kinase
cn_combo_scaffold_1409_19
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11686..12444)
DNA (759bp) protein (253aa)
Putative two-component response regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A659_9SPHN
transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
transcriptional regulator
cn_combo_scaffold_1409_20
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12555..14924
DNA (2370bp) protein (790aa)
Putative TonB-dependent receptor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXV7_9SPHN
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
TonB-dependent receptor
cn_combo_scaffold_1409_21
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15393..17696
DNA (2304bp) protein (768aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UY00_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:KGB58944.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
TonB-dependent receptor
cn_combo_scaffold_1409_22
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17723..19357
DNA (1635bp) protein (545aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Carboxylesterase type B n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UYI7_9SPHN
carboxylesterase type B
cn_combo_scaffold_1409_23
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19354..20919
DNA (1566bp) protein (522aa)
Medium-chain-fatty-acid-CoA ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WI19_9SPHN
alkK2; medium-chain-fatty-acid-CoA ligase
Medium-chain-fatty-acid-CoA ligase {ECO:0000313|EMBL:AJA08563.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sph
cn_combo_scaffold_1409_24
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20971..21666
DNA (696bp) protein (232aa)
TetR family transcriptional regulator n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A68C53
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:KGB58941.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;"
TetR family transcriptional regulator
cn_combo_scaffold_1409_25
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21911..22810
DNA (900bp) protein (300aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WIJ9_9SPHN
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KGB58940.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source
short-chain dehydrogenase/reductase SDR
cn_combo_scaffold_1409_26
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22883..24547
DNA (1665bp) protein (555aa)
General substrate transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXZ7_9SPHN
General substrate transporter {ECO:0000313|EMBL:ENY83290.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingop
major facilitator superfamily protein
cn_combo_scaffold_1409_27
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24563..25891
DNA (1329bp) protein (443aa)
Glycoside hydrolase family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UYI2_9SPHN
Glycoside hydrolase family protein {ECO:0000313|EMBL:ENY83289.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sph
glycoside hydrolase family protein
cn_combo_scaffold_1409_28
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26093..27400)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WI16_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB58938.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_1409_29
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27513..29150
DNA (1638bp) protein (546aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
Carboxylesterase type B n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6Y2_9SPHN
carboxylesterase type B
Displaying items 1-30 of 34 in total

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