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cn_combo_scaffold_472

Alias: SPHP32_194

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Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_472_1
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

479..1024
DNA (546bp) protein (182aa)
Heat shock protein DnaJ-like protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSB1_SPHAL
heat shock protein DnaJ-like protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_472_2
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1221..2099)
DNA (879bp) protein (293aa)
OmpA/MotB n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPJ2_SPHAL
OmpA/MotB {ECO:0000313|EMBL:KGB58277.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
OmpA/MotB protein
cn_combo_scaffold_472_3
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2282..2995)
DNA (714bp) protein (238aa)
mtgA; Monofunctional biosynthetic peptidoglycan transglycosylase (EC:2.4.2.-)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|SAAS:SAAS00055690}; EC=2.4.-.- {ECO:0000256|SAAS:SAAS00279069};; EC=2.4.2.- {ECO:0000256|SAAS:SAAS00055699};; TaxID=1515612 spec
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSB2_SPHAL
cn_combo_scaffold_472_4
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3042..3854
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y855_9SPHN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
cn_combo_scaffold_472_5
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4137..4844)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSB3_SPHAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF53459.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" sour
cn_combo_scaffold_472_6
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5468..6370)
DNA (903bp) protein (301aa)
RNA polymerase sigma factor RpoH n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSB6_SPHAL
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacter
RNA polymerase factor sigma-32
cn_combo_scaffold_472_7
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6451..7407)
DNA (957bp) protein (319aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
Pseudouridine synthase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSB7_SPHAL
pseudouridine synthase RluD
cn_combo_scaffold_472_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7529..8185
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYE0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY80262.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_472_9
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8236..10635
DNA (2400bp) protein (800aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadacea
CheA signal transduction histidine kinases n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSB9_SPHAL
CheA signal transduction histidine kinase
cn_combo_scaffold_472_10
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10632..11069
DNA (438bp) protein (146aa)
CheW protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSC0_SPHAL
CheW protein {ECO:0000313|EMBL:KGB51665.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
CheW protein
cn_combo_scaffold_472_11
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11149..11523
DNA (375bp) protein (125aa)
Response regulator receiver protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPA8_9SPHN
Response regulator receiver protein {ECO:0000313|EMBL:KGB58205.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sp
response regulator receiver protein
cn_combo_scaffold_472_12
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11543..12661
DNA (1119bp) protein (373aa)
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00070601}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00070601};; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
Response regulator receiver modulated CheB methylesterase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSC2_SPHAL
response regulator receiver modulated CheB methylesterase
cn_combo_scaffold_472_13
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12658..13518
DNA (861bp) protein (287aa)
chemotaxis protein CheR; K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Chemotaxis protein CheR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYE4_9SPHN
chemotaxis protein CheR
cn_combo_scaffold_472_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13598..14287
DNA (690bp) protein (230aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9B6_9SPHN
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ENY80268.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sph
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
cn_combo_scaffold_472_15
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15114..15269
DNA (156bp) protein (52aa)
Putative membrane protein
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
cn_combo_scaffold_472_16
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15608..16099)
DNA (492bp) protein (164aa)
Transcription elongation factor GreB n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPB0_9SPHN
transcription elongation factor GreB
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_472_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16105..18138)
DNA (2034bp) protein (678aa)
Lytic transglycosylase, catalytic n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WA08_9SPHN
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ENY80271.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphi
lytic transglycosylase, catalytic
cn_combo_scaffold_472_18
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18239..19114
DNA (876bp) protein (292aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
dapA; 4-hydroxy-tetrahydrodipicolinate synthase (EC:4.3.3.7)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=DAPA_SPHAL
cn_combo_scaffold_472_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19200..19685
DNA (486bp) protein (162aa)
SsrA-binding protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9B9_9SPHN
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphing
smpB; SsrA-binding protein
cn_combo_scaffold_472_20
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19682..20299
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPL5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB51676.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_472_21
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20394..22460
DNA (2067bp) protein (689aa)
Endothelin-converting enzyme 1 {ECO:0000313|EMBL:KGB58215.1}; EC=3.4.24.71 {ECO:0000313|EMBL:KGB58215.1};; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphin
Endothelin-converting protein 1 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPB5_9SPHN
endothelin-converting protein 1
cn_combo_scaffold_472_22
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22483..24981
DNA (2499bp) protein (833aa)
periplasmic sensor hybrid histidine kinase; K13587 two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3] Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curate
Periplasmic sensor hybrid histidine kinase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WA10_9SPHN
periplasmic sensor hybrid histidine kinase
cn_combo_scaffold_472_23
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24950..25324
DNA (375bp) protein (125aa)
Response regulator receiver protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYF3_9SPHN
response regulator receiver protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
response regulator receiver protein
cn_combo_scaffold_472_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


25441..26520
DNA (1080bp) protein (360aa)
Protein RecA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9C3_9SPHN
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1174684 species="Bacteria; Proteoba
recA; recombinase A
cn_combo_scaffold_472_25
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26761..27453)
DNA (693bp) protein (231aa)
Transcriptional regulator, TetR family n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WDV3_PSYWF
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABQ93844.1}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psyc
cn_combo_scaffold_472_26
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27623..28813)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQC0_PARL1
Uncharacterized protein {ECO:0000313|EMBL:CDO60183.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectoca
hypothetical protein
cn_combo_scaffold_472_27
Marinobacter similis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28870..29613)
DNA (744bp) protein (248aa)
Maleate isomerase {ECO:0000256|HAMAP-Rule:MF_00943}; EC=5.2.1.1 {ECO:0000256|HAMAP-Rule:MF_00943};; Maleate cis-trans isomerase {ECO:0000256|HAMAP-Rule:MF_00943}; TaxID=1420916 species="Bacteria; Prot
Asp/Glu racemase n=1 Tax=Acidovorax avenae RepID=UPI0003107CC0
Asp/Glu racemase
cn_combo_scaffold_472_28
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(29660..30811)
DNA (1152bp) protein (384aa)
Putative lipid-transfer protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5AKZ4_9ACTN
putative lipid-transfer protein
Putative lipid-transfer protein {ECO:0000313|EMBL:BAN02020.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobac
cn_combo_scaffold_472_29
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(30811..31203)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A0V2_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN02021.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter cocc
cn_combo_scaffold_472_30
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31291..32097
DNA (807bp) protein (269aa)
Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily protein {ECO:0000313|EMBL:ACL05036.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ACL05036.1};; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobac
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Alicyclobacillus pohliae RepID=UPI00037FAC82
enoyl-CoA hydratase/isomerase
Displaying items 1-30 of 77 in total

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