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cn_combo_scaffold_846

Alias: SPHP32_200

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Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_846_1
Sphingomonas sp. KA1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109..1110)
DNA (1002bp) protein (334aa)
integrase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036DD69F
Putative integrase {ECO:0000313|EMBL:BAF03436.1}; TaxID=164608 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. KA1
phage integrase
cn_combo_scaffold_846_2
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1107..2018)
DNA (912bp) protein (304aa)
integrase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A7BC
phage integrase
Phage integrase {ECO:0000313|EMBL:CCA91275.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp.
cn_combo_scaffold_846_3
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2012..3538)
DNA (1527bp) protein (509aa)
putative integrase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A7BD
integrase/recombinase XerD
Integrase/recombinase XerD {ECO:0000313|EMBL:AGT11583.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus amin
cn_combo_scaffold_846_4
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3673..4812
DNA (1140bp) protein (380aa)
ParB-like protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VNX8_9SPHN
ParB-like protein {ECO:0000313|EMBL:KGB55019.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC8
ParB-like protein
cn_combo_scaffold_846_5
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4926..5426)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CWI2_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU76313.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yano
hypothetical protein
cn_combo_scaffold_846_6
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5590..6510
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J3U9_9SPHN
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AJA11275.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_846_7
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6547..6990)
DNA (444bp) protein (148aa)
glutathione-dependent formaldehyde-activating GFA n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0772
glutathione-dependent formaldehyde-activating protein Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
glutathione-dependent formaldehyde-activating protein
cn_combo_scaffold_846_8
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7243..7785
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HWZ1_9SPHN
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AJA09272.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_846_9
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7782..8297
DNA (516bp) protein (172aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CP58_SPHYA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA09273.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_846_10
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8294..9241
DNA (948bp) protein (316aa)
RNA polymerase sigma factor SigJ {ECO:0000313|EMBL:KGB55015.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphin
hypothetical protein
cn_combo_scaffold_846_11
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9737..10156
DNA (420bp) protein (140aa)
Transcriptional regulator, MucR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRE6_SPHAL
Transcriptional regulator, MucR family {ECO:0000313|EMBL:KGB57715.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source=
MucR family transcriptional regulator
cn_combo_scaffold_846_12
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10214..10465)
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH43039.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
cn_combo_scaffold_846_13
unknown

Not on your lists

comp(10465..10740)
DNA (276bp) protein (92aa)

This feature has no annotations

cn_combo_scaffold_846_14
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10784..10951)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9DDJ7_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:KGB57716.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_846_15
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10948..11205)
DNA (258bp) protein (86aa)
Conjugal transfer TraD n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MRF2_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA09275.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_846_16
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11228..11533)
DNA (306bp) protein (102aa)
conjugal transfer protein TraD n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C651
Conjugal transfer protein TraD {ECO:0000313|EMBL:KGB57718.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingo
hypothetical protein
cn_combo_scaffold_846_17
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11706..14645
DNA (2940bp) protein (980aa)
Conjugal transfer protein TraA n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILJ4_9SPHN
conjugal transfer relaxase TraA rbh
Conjugal transfer relaxase TraA {ECO:0000313|EMBL:AJA09277.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphing
cn_combo_scaffold_846_18
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14655..15359
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VUT0_9SPHN
Putative membrane protein rbh
Putative membrane protein {ECO:0000313|EMBL:AJA09278.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
cn_combo_scaffold_846_19
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15473..16075
DNA (603bp) protein (201aa)
Glutathione S-transferase, N-terminal domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WTK8_9SYNE
Glutathione S-transferase, N-terminal domain protein {ECO:0000313|EMBL:EDX83589.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synecho
glutathione S-transferase domain-containing protein
cn_combo_scaffold_846_20
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16357..16869)
DNA (513bp) protein (171aa)
IstB ATP binding domain-containing protein n=2 Tax=Alphaproteobacteria RepID=I5BRQ5_9RHIZ
IstB ATP binding domain-containing protein {ECO:0000313|EMBL:EIM72257.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" sour
IstB ATP binding domain-containing protein
cn_combo_scaffold_846_21
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17004..20129)
DNA (3126bp) protein (1042aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQ32_9SPHN
TonB-dependent receptor-like protein Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
TonB-dependent receptor-like protein
cn_combo_scaffold_846_22
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20248..21345)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JUN9_AGRVS
Ammonia monooxygenase {ECO:0000313|EMBL:KGM33849.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus
hypothetical protein
cn_combo_scaffold_846_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21338..22678)
DNA (1341bp) protein (447aa)
Citrate transporter n=1 Tax=Pseudomonas syringae pv. aceris str. M302273 RepID=F3JKB5_PSESX
Sphingomonas taxi strain 30a NODE_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26024.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
citrate transporter
cn_combo_scaffold_846_24
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22837..24207)
DNA (1371bp) protein (457aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadacea
Two-component sensor histidine kinase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NZK8_AZOS1
two-component sensor histidine kinase
cn_combo_scaffold_846_25
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24246..24914)
DNA (669bp) protein (223aa)
transcriptional regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B56DDE
Sphingomonas taxi strain 30a NODE_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26023.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
DNA-binding two-component response regulator
cn_combo_scaffold_846_26
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24994..26133
DNA (1140bp) protein (380aa)
ABC-type Fe3+ transport system, periplasmic component n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PN21_9DELT
Sphingomonas taxi strain 30a NODE_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26022.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
ABC fe3+ siderophore transporter periplasmic ligand binding protein
cn_combo_scaffold_846_27
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26786..28861)
DNA (2076bp) protein (692aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC402 RepID=V4NFT4_9CAUL
TonB-dependent siderophore receptor {ECO:0000313|EMBL:KGB55005.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sp
TonB-dependent siderophore receptor rbh
cn_combo_scaffold_846_28
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29359..29919)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V108_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYD75948.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrob
hypothetical protein
cn_combo_scaffold_846_29
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30002..30556
DNA (555bp) protein (185aa)
Transposase, mutator type n=2 Tax=Sphingomonadaceae RepID=N1ML42_9SPHN
transposase
Transposase, mutator type {ECO:0000313|EMBL:CCW17651.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium j
cn_combo_scaffold_846_30
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30777..31571)
DNA (795bp) protein (265aa)
Two-component response regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXD4_9SPHN
Two-component response regulator {ECO:0000313|EMBL:ENY83095.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphin
transcriptional regulator
Displaying items 1-30 of 75 in total

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