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cn_combo_scaffold_1407

Alias: SPHP32_203

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Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1407_1
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82..1275
DNA (1194bp) protein (398aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SMR2_9RHOB
Flagellar biosynthesis protein FliA {ECO:0000313|EMBL:AKH18669.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sp
hypothetical protein
cn_combo_scaffold_1407_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1300..1947
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C14F
Uncharacterized protein {ECO:0000313|EMBL:AKH18670.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
cn_combo_scaffold_1407_3
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1944..2159
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KNU8_METEX
Uncharacterized protein {ECO:0000313|EMBL:AKH18671.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
cn_combo_scaffold_1407_4
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2156..2788
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QIN9_BREDI
Uncharacterized protein {ECO:0000313|EMBL:AKH18672.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
cn_combo_scaffold_1407_5
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2829..3731)
DNA (903bp) protein (301aa)
Mobile element protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MP08_9SPHN
Mobile element protein {ECO:0000313|EMBL:CCW17372.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japo
integrase catalytic subunit
cn_combo_scaffold_1407_6
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3731..4057)
DNA (327bp) protein (109aa)
Mobile element protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MPJ2_9SPHN
Mobile element protein {ECO:0000313|EMBL:CCW17373.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japo
transposase IS3 family protein
cn_combo_scaffold_1407_7
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4161..4823)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MM21_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW16538.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium jap
XRE family transcriptional regulator
cn_combo_scaffold_1407_8
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4880..5683
DNA (804bp) protein (268aa)
Protein-disulfide isomerase n=2 Tax=Sphingomonadaceae RepID=T0G387_9SPHN
putative protein-disulfide isomerase
Uncharacterized protein {ECO:0000313|EMBL:AJA09629.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_1407_9
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5868..6182
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IP90_9SPHN
Putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:AJA09630.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
cn_combo_scaffold_1407_10
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6318..6584
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z8X3_SPHJU
Conserved Putative membrane protein
Conserved Putative membrane protein {ECO:0000313|EMBL:AJA09631.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sp
cn_combo_scaffold_1407_11
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6593..7228
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D3E4_SPHYA
putative sex pilus assembly and synthesis protein rbh
Putative sex pilus assembly and synthesis protein {ECO:0000313|EMBL:AJA09632.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis
cn_combo_scaffold_1407_12
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7212..7976
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IM52_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA09633.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_1407_13
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7973..9265
DNA (1293bp) protein (431aa)
Conjugal transfer protein TraB n=2 Tax=Sphingomonadaceae RepID=T0G382_9SPHN
traB; conjugal transfer protein TraB
Conjugal transfer protein TraB {ECO:0000313|EMBL:AJA09634.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingo
cn_combo_scaffold_1407_14
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9267..10007
DNA (741bp) protein (247aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadacea
DNA methylase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HUC2_9SPHN
DNA methylase N-4/N-6 domain-containing protein
cn_combo_scaffold_1407_15
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10332..10940
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MM31_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA09635.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_1407_16
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10937..13471
DNA (2535bp) protein (845aa)
Type IV secretory pathway VirB4 component n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z8X8_SPHJU
traC2; type IV secretory pathway VirB4 component rbh
Type IV secretory pathway VirB4 component {ECO:0000313|EMBL:AJA09636.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" sour
cn_combo_scaffold_1407_17
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13468..13797
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z8X9_SPHJU
Putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AJA09637.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
cn_combo_scaffold_1407_18
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13794..14030
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003644DDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA07203.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_1407_19
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14020..14670
DNA (651bp) protein (217aa)
Conjugal transfer protein TraW n=2 Tax=Sphingomonadaceae RepID=T0HKI3_9SPHN
traW; plasmid transfer protein TraW
Plasmid transfer protein TraW {ECO:0000313|EMBL:AJA09638.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingop
cn_combo_scaffold_1407_20
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14888..15352)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HGY2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11358.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lac
Aha1 domain-containing protein
cn_combo_scaffold_1407_21
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15745..16824
DNA (1080bp) protein (360aa)
UPI0003D650CB related cluster n=1 Tax=unknown RepID=UPI0003D650CB
TraU family protein
TraU family protein {ECO:0000313|EMBL:AJA09639.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribe
cn_combo_scaffold_1407_22
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17167..19110
DNA (1944bp) protein (648aa)
Putative exported protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z8Y4_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:AJA09640.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
hypothetical protein rbh
cn_combo_scaffold_1407_23
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19107..20222
DNA (1116bp) protein (372aa)
Mating pair stabilization protein TraN n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z8Y5_SPHJU
traN; mating pair stabilization protein TraN
Mating pair stabilization protein TraN {ECO:0000313|EMBL:AJA09641.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source=
cn_combo_scaffold_1407_24
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20194..21087
DNA (894bp) protein (298aa)
Type-F conjugative transfer system pilin assembly protein TrbC n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D7G1_SPHYA
type-F conjugative transfer system pilin assembly protein TrbC
Type-F conjugative transfer system pilin assembly protein TrbC {ECO:0000313|EMBL:AJA09642.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
cn_combo_scaffold_1407_25
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21059..21658
DNA (600bp) protein (200aa)
UPI0003D6888D related cluster n=1 Tax=unknown RepID=UPI0003D6888D
type IV secretory protease
Type IV secretory protease {ECO:0000313|EMBL:AJA09643.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxi
cn_combo_scaffold_1407_26
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21658..22545
DNA (888bp) protein (296aa)
Thioredoxin-related protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6ESV5_SPHCR
thioredoxin-like protein rbh
Thioredoxin-like protein {ECO:0000313|EMBL:AJA09644.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
cn_combo_scaffold_1407_27
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22542..23126
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GTW1_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA09646.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_1407_28
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23138..24304)
DNA (1167bp) protein (389aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Phyllobacterium sp. YR531 RepID=J2V917_9RHIZ
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:EJN02357.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyl
hypothetical protein
cn_combo_scaffold_1407_29
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24404..25816
DNA (1413bp) protein (471aa)
Conjugal transfer protein TraH n=2 Tax=Sphingomonadaceae RepID=T0G3R7_9SPHN
sex pilus assembly protein TraH
Sex pilus assembly protein TraH {ECO:0000313|EMBL:AJA09651.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphing
cn_combo_scaffold_1407_30
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25822..29556
DNA (3735bp) protein (1245aa)
DNA transfer and F pilus assembly protein TraG n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6ESV8_SPHCR
DNA transfer and F pilus assembly protein TraG
DNA transfer and F pilus assembly protein TraG {ECO:0000313|EMBL:AJA09652.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;"
Displaying items 1-30 of 65 in total

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