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cn_combo_scaffold_285

Alias: SPHP32_2

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_285_1
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55..723)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000370A1D9
ParB-like protein; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
ParB-like protein
cn_combo_scaffold_285_2
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(809..1243)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003690D0B
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_285_3
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1240..1740)
DNA (501bp) protein (167aa)
antirepressor n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037CDC0D
antirestriction protein ArdC Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
antirestriction protein ArdC
cn_combo_scaffold_285_4
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1750..2211)
DNA (462bp) protein (154aa)
antirepressor n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037CDC0D
antirestriction protein ArdC Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
antirestriction protein ArdC
cn_combo_scaffold_285_5
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2727..3167)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000381256D
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
hypothetical protein
cn_combo_scaffold_285_6
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3237..3878)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036A28B9
putative lytic transglycosylase
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_285_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3866..4387)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003655823
Conjugal transfer protein TraF {ECO:0000313|EMBL:KHS45894.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
conjugal transfer protein TraF
cn_combo_scaffold_285_8
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4380..4691)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z5D3_SPHJU
Uncharacterized protein {ECO:0000313|EMBL:KHS45893.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
cn_combo_scaffold_285_9
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4722..5597)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000373F3CC
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:KHS45892.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
cn_combo_scaffold_285_10
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5609..6223)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037D651F
N-acyl-L-homoserine lactone synthase
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_285_11
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6316..7062)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000375D174
luxR; LuxR-family transcriptional regulator
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_285_12
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7149..7424)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037BB733
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_285_13
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7963..9108)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003789C75
L-carnitine dehydratase/bile acid-inducible protein F rbh
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_285_14
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9189..10190
DNA (1002bp) protein (334aa)
LysR family transcriptional regulator n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000371705D
LysR family transcriptional regulator {ECO:0000313|EMBL:KHS45887.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
regulatory protein LysR
cn_combo_scaffold_285_15
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10355..11380)
DNA (1026bp) protein (342aa)
Outer membrane protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7V1_ERYLH
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:ABC64240.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
cn_combo_scaffold_285_16
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11437..12516)
DNA (1080bp) protein (360aa)
TonB-dependent receptor n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7V2_ERYLH
TonB-dependent receptor
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_285_17
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12699..13601)
DNA (903bp) protein (301aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7V3_ERYLH
oxidoreductase, short chain dehydrogenase/reductas
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:ABC64238.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacterac
cn_combo_scaffold_285_18
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13707..14852)
DNA (1146bp) protein (382aa)
acyl-CoA dehydrogenase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000361B4CA
acyl-CoA dehydrogenase, short-chain specific
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_285_19
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14890..16128)
DNA (1239bp) protein (413aa)
Thiolase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7V5_ERYLH
thiolase
Thiolase {ECO:0000313|EMBL:ABC64236.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (str
cn_combo_scaffold_285_20
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16172..16966)
DNA (795bp) protein (265aa)
Probable enoyl CoA hydratase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7V6_ERYLH
enoyl CoA hydratase
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_285_21
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17033..18577)
DNA (1545bp) protein (515aa)
AMP-dependent synthetase and ligase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7V7_ERYLH
AMP-dependent synthetase and ligase
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_285_22
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18707..20341)
DNA (1635bp) protein (545aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000378828C
oxidoreductase, GMC family protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_285_23
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20418..21842)
DNA (1425bp) protein (475aa)
Aldehyde dehydrogenase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7V9_ERYLH
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
coniferyl aldehyde dehydrogenase
cn_combo_scaffold_285_24
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21844..21987)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7W0_ERYLH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC64231.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
cn_combo_scaffold_285_25
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22073..24682)
DNA (2610bp) protein (870aa)
TonB-dependent receptor n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7W1_ERYLH
TonB-dependent receptor {ECO:0000313|EMBL:KHS45876.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
TonB-dependent receptor rbh
cn_combo_scaffold_285_26
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25224..26153)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7W2_ERYLH
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABC64229.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
cn_combo_scaffold_285_27
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26167..26958)
DNA (792bp) protein (264aa)
Putative cyclase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N7W3_ERYLH
cyclase
Putative cyclase {ECO:0000313|EMBL:ABC64228.1}; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litora
cn_combo_scaffold_285_28
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26975..29299)
DNA (2325bp) protein (775aa)
Outer membrane receptor protein n=1 Tax=Caulobacter sp. AP07 RepID=J2PJ48_9CAUL
Outer membrane receptor protein {ECO:0000313|EMBL:EJL27362.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;
TonB-dependent receptor rbh
cn_combo_scaffold_285_29
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29364..30782)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2N7U3_9ACTO
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:EXG82083.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptospor
mtaD3; 5-methylthioadenosine/S-adenosylhomocysteine deaminase
cn_combo_scaffold_285_30
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30905..31612
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI0003700BD9
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EZP71991.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
TetR family transcriptional regulator
Displaying items 1-30 of 106 in total

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