ggKbase home page

cn_combo_scaffold_574

Alias: SPHP32_9

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_574_1
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34..777)
DNA (744bp) protein (248aa)
integrase n=1 Tax=Sphingomonas elodea RepID=UPI0002631A91
Putative insertion sequence transposase protein {ECO:0000313|EMBL:EAV43515.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" sour
Integrase catalytic subunit
cn_combo_scaffold_574_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1120..3435)
DNA (2316bp) protein (772aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=117468
Polyribonucleotide nucleotidyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDA1_9SPHN
polynucleotide phosphorylase/polyadenylase
cn_combo_scaffold_574_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3627..3896)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTW5_9SPHN
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; S
rpsO; 30S ribosomal protein S15
cn_combo_scaffold_574_4
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3922..4878)
DNA (957bp) protein (319aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVR0_SPHAL
tRNA pseudouridine synthase B
cn_combo_scaffold_574_5
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4934..5320)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVR1_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:KGB54344.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
Putative secreted protein
cn_combo_scaffold_574_6
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5488..6024)
DNA (537bp) protein (179aa)
GCN5-related N-acetyltransferase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVR2_SPHAL
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KGB58329.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphin
N-acetyltransferase GCN5
cn_combo_scaffold_574_7
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6017..6625)
DNA (609bp) protein (203aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1120705 species="Bacteria; Prote
tdk; Thymidine kinase (EC:2.7.1.21)
Thymidine kinase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVR3_SPHAL
cn_combo_scaffold_574_8
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6666..7097)
DNA (432bp) protein (144aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVR5_SPHAL
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ABF52257.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" sou
cn_combo_scaffold_574_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7194..7685
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WE36_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81701.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_574_10
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7666..8091
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVR7_SPHAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF52255.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis al
cn_combo_scaffold_574_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8094..8405
DNA (312bp) protein (104aa)
Globin family protein 1 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T305_ALCXX
Tellurite resistance protein TehB {ECO:0000313|EMBL:AKH41334.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" sourc
hypothetical protein
cn_combo_scaffold_574_12
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8469..9893
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2H0_9SPHN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
cn_combo_scaffold_574_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9928..10329)
DNA (402bp) protein (134aa)
Ribosome-binding factor A n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDB0_9SPHN
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingop
rbfA; ribosome-binding factor A
cn_combo_scaffold_574_14
Brucella suis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10319..10738)
DNA (420bp) protein (140aa)
Uncharacterized domain 1 n=234 Tax=Brucellaceae RepID=A9M7N1_BRUC2
Hypothetical protein
Thioesterase superfamily protein {ECO:0000313|EMBL:EEY28568.1}; TaxID=520489 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella suis bv. 5
cn_combo_scaffold_574_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10751..13282)
DNA (2532bp) protein (844aa)
Translation initiation factor IF-2 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTD6_9SPHN
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
infB; translation initiation factor IF-2
cn_combo_scaffold_574_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13300..14058)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WE40_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81706.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_574_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14039..15679)
DNA (1641bp) protein (547aa)
Transcription elongation factor NusA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2H5_9SPHN
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sph
nusA; transcription elongation factor NusA
cn_combo_scaffold_574_18
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15679..16224)
DNA (546bp) protein (182aa)
Ribosome maturation factor RimP n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=RIMP_SPHAL
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
hypothetical protein
cn_combo_scaffold_574_19
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16546..17472
DNA (927bp) protein (309aa)
Cation diffusion facilitator family transporter n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XET6_NOVAD
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:KGB54356.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;
cation efflux protein
cn_combo_scaffold_574_20
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17553..19379
DNA (1827bp) protein (609aa)
Gamma-glutamyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXT2_9SPHN
Gamma-glutamyltransferase {ECO:0000313|EMBL:ENY83200.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
gamma-glutamyltransferase rbh
cn_combo_scaffold_574_21
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19435..20229
DNA (795bp) protein (265aa)
ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTE1_9SPHN
ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA {ECO:0000313|EMBL:ENY81710.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; S
ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
cn_combo_scaffold_574_22
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20421..21560
DNA (1140bp) protein (380aa)
Cell wall hydrolase SleB n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WE45_9SPHN
Cell wall hydrolase, SleB {ECO:0000313|EMBL:KGB54361.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
cell wall hydrolase SleB
cn_combo_scaffold_574_23
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21605..21991
DNA (387bp) protein (129aa)
Glyoxalase family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2H7_9SPHN
Glyoxalase family protein {ECO:0000313|EMBL:ENY81712.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
glyoxalase family protein
cn_combo_scaffold_574_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22056..23780)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDB8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81713.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_574_25
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23866..24639)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTX8_9SPHN
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
hypothetical protein
cn_combo_scaffold_574_26
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24636..25544)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTE4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81715.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_574_27
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25646..26827)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WE48_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB58343.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_574_28
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26827..28272)
DNA (1446bp) protein (482aa)
Bacteriophage N4 adsorption protein B n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2I2_9SPHN
bacteriophage N4 adsorption protein B; K11740 bacteriophage N4 adsorption protein B Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
bacteriophage N4 adsorption protein B
cn_combo_scaffold_574_29
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28789..30066
DNA (1278bp) protein (426aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=NHAA_SPHAL
nhaA; Na(+)/H(+) antiporter NhaA
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sph
cn_combo_scaffold_574_30
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30341..31108
DNA (768bp) protein (256aa)
Tryptophan 23-dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTE9_9SPHN
Tryptophan 23-dioxygenase {ECO:0000313|EMBL:ENY81720.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
tryptophan 2 3-dioxygenase-like protein
Displaying items 1-30 of 67 in total

View Taxonomy