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cn_combo_scaffold_942

Alias: SPHP32_15

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Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_942_1
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(258..1022)
DNA (765bp) protein (255aa)
Zinc finger/thioredoxin putative n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW90_9SPHN
Zinc finger/thioredoxin putative
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_942_2
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1190..1939
DNA (750bp) protein (250aa)
ABC transporter related n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GP25_SPHAL
ABC transporter {ECO:0000313|EMBL:KGB54687.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.
ABC transporter rbh
cn_combo_scaffold_942_3
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1944..2852
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GP26_SPHAL
Cell division protein {ECO:0000313|EMBL:KGB52821.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp.
hypothetical protein
cn_combo_scaffold_942_4
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2849..3379
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGF7_9SPHN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
cn_combo_scaffold_942_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3376..4101
DNA (726bp) protein (242aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVP6_9SPHN
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ENY82535.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="
phospholipid/glycerol acyltransferase
cn_combo_scaffold_942_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4413..5321)
DNA (909bp) protein (303aa)
Cyclohexadienyl dehydrogenase {ECO:0000313|EMBL:ENY82534.1}; EC=1.3.1.12 {ECO:0000313|EMBL:ENY82534.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingo
Cyclohexadienyl dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW85_9SPHN
cyclohexadienyl dehydrogenase
cn_combo_scaffold_942_7
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5327..6523)
DNA (1197bp) protein (399aa)
Histidinol-phosphate aminotransferase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=HIS8_SPHAL
histidinol-phosphate aminotransferase
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_942_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6558..7640
DNA (1083bp) protein (361aa)
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acety
Homoserine O-acetyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4R5_9SPHN
metX; homoserine O-acetyltransferase
cn_combo_scaffold_942_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7643..8230
DNA (588bp) protein (196aa)
Methionine biosynthesis MetW n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGF1_9SPHN
Methionine biosynthesis MetW {ECO:0000313|EMBL:ENY82531.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
methionine biosynthesis MetW
cn_combo_scaffold_942_10
Hyphomonas hirschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8416..8874)
DNA (459bp) protein (153aa)
Transcriptional regulator, AsnC family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C5S7_HYPNA
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:KCZ89333.1}; TaxID=1280951 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hypho
cn_combo_scaffold_942_11
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8993..10027
DNA (1035bp) protein (345aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VKA0_CAUST
pyridoxal-5'-phosphate-dependent protein subunit beta
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:ADG10923.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter
cn_combo_scaffold_942_12
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10085..10702
DNA (618bp) protein (206aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AB99
Uncharacterized protein {ECO:0000313|EMBL:EQB06172.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium bad
RNA polymerase ECF-type sigma factor
cn_combo_scaffold_942_13
Asticcacaulis sp. AC460, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10671..11747
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4PP72_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ87295.1}; TaxID=1282360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
putative anti-sigma factor
cn_combo_scaffold_942_14
Novosphingobium sp. MBES04, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11801..14953
DNA (3153bp) protein (1051aa)
TonB-dependent receptor n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262B80E
TonB-dependent receptor {ECO:0000313|EMBL:GAM07616.1}; TaxID=1206458 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
TonB-dependent receptor
cn_combo_scaffold_942_15
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15001..17421
DNA (2421bp) protein (807aa)
dipeptidyl-peptidase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B01F
Dipeptidyl peptidase IV (DPP IV) {ECO:0000313|EMBL:KEZ15403.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob
dipeptidyl aminopeptidase/acylaminoacyl-peptidase rbh
cn_combo_scaffold_942_16
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17418..18044
DNA (627bp) protein (209aa)
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family n=1 Tax=Caulobacter crescentus OR37 RepID=R0EIQ5_CAUCE
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:ENZ81889.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae
cyclophilin type peptidyl-prolyl cis-trans isomerase
cn_combo_scaffold_942_17
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18072..19829
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SAQ4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO39815.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
hypothetical protein
cn_combo_scaffold_942_18
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19891..21330)
DNA (1440bp) protein (480aa)
Cobyric acid synthase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=COBQ_SPHWW
cobQ; Cobyric acid synthase
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
cn_combo_scaffold_942_19
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21342..22118)
DNA (777bp) protein (259aa)
ABC transporter related n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GUF4_SPHAL
ABC transporter {ECO:0000313|EMBL:KGB51615.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.
ABC transporter
cn_combo_scaffold_942_20
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22112..23116)
DNA (1005bp) protein (335aa)
Transport system permease protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GUF3_SPHAL
Transport system permease protein {ECO:0000313|EMBL:KGB58147.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphi
transport system permease
cn_combo_scaffold_942_21
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23113..23976)
DNA (864bp) protein (288aa)
Periplasmic binding protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GUF2_SPHAL
Iron ABC transporter {ECO:0000313|EMBL:KGB58148.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp.
putative Fe ABC transporter
cn_combo_scaffold_942_22
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23993..25921)
DNA (1929bp) protein (643aa)
TonB-denpendent receptor n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GXG0_9SPHN
TonB-denpendent receptor {ECO:0000313|EMBL:EQB05332.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qu
TonB-dependent receptor
cn_combo_scaffold_942_23
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26428..26817
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTM6_9SPHN
Conserved Putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ENY81810.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
cn_combo_scaffold_942_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26886..28907
DNA (2022bp) protein (674aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU48_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:ENY81809.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
TonB-dependent receptor
cn_combo_scaffold_942_25
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29022..29237
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLK3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62894.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgen
cn_combo_scaffold_942_26
Pseudomonas sp. AAC, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29230..29784
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HTT2_PSEUO
DNA repair protein {ECO:0000313|EMBL:KES20131.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;"
DNA repair protein
cn_combo_scaffold_942_27
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29840..30475
DNA (636bp) protein (212aa)
Uracil-DNA glycosylase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QRN2_9BURK
uracil-DNA glycosylase-like protein
Uracil-DNA glycosylase-like protein {ECO:0000313|EMBL:AHG62268.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefo
cn_combo_scaffold_942_28
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30523..32655)
DNA (2133bp) protein (711aa)
Hep_Hag family protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225E43A
xadA1; adhesin XadA Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hep_Hag family protein
cn_combo_scaffold_942_29
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32920..33384
DNA (465bp) protein (155aa)
ECF sigma factor family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWZ9_9SPHN
ECF sigma factor family protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
ECF sigma factor family protein
cn_combo_scaffold_942_30
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33436..33810)
DNA (375bp) protein (125aa)
Arylsulfatase A family protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2HD31_9SPHN
arylsulfatase A family protein
Arylsulfatase A family protein {ECO:0000313|EMBL:KGB58369.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingo
Displaying items 1-30 of 79 in total

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