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cn_combo_scaffold_1047

Alias: SPHP32_19

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1047_1
Hyphomonas sp. L-53-1-40, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

589..1338
DNA (750bp) protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ64588.1}; TaxID=1207058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. L-53
cn_combo_scaffold_1047_2
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1459..2271)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036DE387
Putative transposase {ECO:0000313|EMBL:GAO39187.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas chan
ISSpo3, transposase
cn_combo_scaffold_1047_3
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2220..3617)
DNA (1398bp) protein (466aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SE37_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:KGB52709.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
outer membrane cobalamin receptor protein
cn_combo_scaffold_1047_4
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4071..5153)
DNA (1083bp) protein (361aa)
anti-FecI sigma factor FecR n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A1E7A9
Anti-FecI sigma factor FecR {ECO:0000313|EMBL:KGB53962.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyx
anti-FecI sigma factor FecR
cn_combo_scaffold_1047_5
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5150..5692)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00035DDA52
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:KEQ53395.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sour
ECF subfamily RNA polymerase sigma-24 factor
cn_combo_scaffold_1047_6
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5768..6112)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EAY4_9SPHN
ArsC family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EHJ61547.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
cn_combo_scaffold_1047_7
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6189..6863)
DNA (675bp) protein (225aa)
Cyclic nucleotide-binding protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GR02_SPHAL
cyclic nucleotide-binding protein
cyclic nucleotide-binding protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
cn_combo_scaffold_1047_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6905..8488
DNA (1584bp) protein (528aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WI23_9SPHN
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:ENY83126.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" so
phospho-2-dehydro-3-deoxyheptonate aldolase
cn_combo_scaffold_1047_9
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8724..10223)
DNA (1500bp) protein (500aa)
Peptidase M28 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GR00_SPHAL
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:ABF53922.1}; Flags: Precursor;; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphing
cn_combo_scaffold_1047_10
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10514..11320)
DNA (807bp) protein (269aa)
HpcH/HpaI aldolase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQZ9_SPHAL
HpcH/HpaI aldolase rbh
HpcH/HpaI aldolase {ECO:0000313|EMBL:ABF53923.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alasken
cn_combo_scaffold_1047_11
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11388..12299
DNA (912bp) protein (304aa)
SPFH domain, Band 7 family protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQZ8_SPHAL
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_1047_12
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12301..12747
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQZ7_SPHAL
NfeD family protein {ECO:0000313|EMBL:KGB56472.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. L
hypothetical protein
cn_combo_scaffold_1047_13
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12987..13562)
DNA (576bp) protein (192aa)
N-acetyltransferase GCN5 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6J2_9SPHN
N-acetyltransferase GCN5 Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
N-acetyltransferase GCN5
cn_combo_scaffold_1047_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13662..14552)
DNA (891bp) protein (297aa)
FF domain-containing protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UY41_9SPHN
FF domain-containing protein {ECO:0000313|EMBL:ENY83134.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
FF domain-containing protein
cn_combo_scaffold_1047_15
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14626..15237
DNA (612bp) protein (204aa)
Transcriptional regulator, TetR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRC8_SPHAL
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KGB56468.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source=
TetR family transcriptional regulator
cn_combo_scaffold_1047_16
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15306..16349
DNA (1044bp) protein (348aa)
GTPase Obg n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=OBG_SPHAL
obgE; GTPase ObgE
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000255|HAMAP-Rule:MF_01454}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingom
cn_combo_scaffold_1047_17
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16440..17582
DNA (1143bp) protein (381aa)
gamma-glutamyl kinase; K00931 glutamate 5-kinase [EC:2.7.2.11] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Glutamate 5-kinase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=PROB_SPHAL
gamma-glutamyl kinase
cn_combo_scaffold_1047_18
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17623..18540
DNA (918bp) protein (306aa)
Male sterility-like protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQZ3_SPHAL
Male sterility-like protein {ECO:0000313|EMBL:KGB52453.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyx
Male sterility-like protein
cn_combo_scaffold_1047_19
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18648..20627
DNA (1980bp) protein (660aa)
Protease 4 {ECO:0000256|PIRNR:PIRNR001217}; EC=3.4.21.- {ECO:0000256|PIRNR:PIRNR001217};; Endopeptidase IV {ECO:0000256|PIRNR:PIRNR001217}; Protease IV {ECO:0000256|PIRNR:PIRNR001217}; Signal peptide
Signal peptide peptidase SppA, 67K type n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQZ2_SPHAL
signal peptide peptidase SppA, 67K type
cn_combo_scaffold_1047_20
Sphingopyxis sp. OB-3, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20635..21537)
DNA (903bp) protein (301aa)
BroH (Fragment) n=1 Tax=Sphingopyxis sp. OB-3 RepID=H6VM91_9SPHN
BroH {ECO:0000313|EMBL:AFA53636.1}; Flags: Fragment;; TaxID=1107309 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp
alpha/beta hydrolase
cn_combo_scaffold_1047_21
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21594..22235)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQZ0_SPHAL
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
hypothetical protein
cn_combo_scaffold_1047_22
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22249..23613)
DNA (1365bp) protein (455aa)
Hippurate hydrolase {ECO:0000313|EMBL:KGB52720.1}; EC=3.5.1.32 {ECO:0000313|EMBL:KGB52720.1};; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030C6AAE
M20/M25/M40 family peptidase
cn_combo_scaffold_1047_23
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23656..25053)
DNA (1398bp) protein (466aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingo
Dihydrolipoyl dehydrogenase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQY8_SPHAL
dihydrolipoamide dehydrogenase rbh
cn_combo_scaffold_1047_24
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25165..26415)
DNA (1251bp) protein (417aa)
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] Tax=RIFCSPHIGHO2
sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (EC:2.3.1.61)
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W3E5_9SPHN
cn_combo_scaffold_1047_25
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26476..29295)
DNA (2820bp) protein (940aa)
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:ENY82063.1}; EC=1.2.4.2 {ECO:0000313|EMBL:ENY82063.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadal
2-oxoglutarate dehydrogenase E1 component n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEA5_9SPHN
sucA; 2-oxoglutarate dehydrogenase E1 component
cn_combo_scaffold_1047_26
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29347..29637)
DNA (291bp) protein (97aa)
Excinuclease ABC subunit C n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTX1_9SPHN
Excinuclease ABC subunit C {ECO:0000313|EMBL:ENY81704.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxi
endonuclease
cn_combo_scaffold_1047_27
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29743..30633)
DNA (891bp) protein (297aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphi
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUT3_9SPHN
succinyl-CoA synthetase subunit alpha
cn_combo_scaffold_1047_28
Sphingomonas sp. NX-3, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30751..31713)
DNA (963bp) protein (321aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=863935 species="Bacteria; Pr
malate dehydrogenase (EC:1.1.1.37) rbh
malate dehydrogenase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003076A17
cn_combo_scaffold_1047_29
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32116..33159
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEB2_9SPHN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
cn_combo_scaffold_1047_30
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33109..34251)
DNA (1143bp) protein (381aa)
AFG1-like ATPase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUU0_9SPHN
AFG1-like ATPase {ECO:0000313|EMBL:ENY82069.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.
AFG1-like ATPase
Displaying items 1-30 of 46 in total

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