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cn_combo_scaffold_1879

Alias: SPHP32_33

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1879_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

878..1252
DNA (375bp) protein (125aa)
Succinate dehydrogenase subunit C n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU36_9SPHN
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:ENY81794.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphi
succinate dehydrogenase, cytochrome b subunit
cn_combo_scaffold_1879_2
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1245..1652
DNA (408bp) protein (136aa)
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:ABF54735.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ABF54735.1};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphin
Succinate dehydrogenase subunit D n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GNN7_SPHAL
succinate dehydrogenase, cytochrome b subunit
cn_combo_scaffold_1879_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1649..3451
DNA (1803bp) protein (601aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingo
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2N4_9SPHN
sdhA; Succinate dehydrogenase flavoprotein subunit
cn_combo_scaffold_1879_4
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3507..3803)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Actinomyces viscosus C505 RepID=F2UWD5_ACTVI
plasmid stabilization system protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_1879_5
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3796..4047)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI00037DE56C
CopG family transcriptional regulator
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_1879_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4099..4392)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEB1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81791.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_1879_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4493..4702)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTK9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81790.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_1879_8
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4771..5766)
DNA (996bp) protein (332aa)
Alcohol dehydrogenase, zinc-binding n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GR81_SPHAL
zinc-binding alcohol dehydrogenase
Zinc-binding alcohol dehydrogenase {ECO:0000313|EMBL:AJA10348.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sph
cn_combo_scaffold_1879_9
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5792..6394)
DNA (603bp) protein (201aa)
leuD2; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDH8_9SPHN
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_1879_10
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6391..6834)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC402 RepID=V4QDG9_9CAUL
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
hypothetical protein
cn_combo_scaffold_1879_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6898..8328)
DNA (1431bp) protein (477aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
3-isopropylmalate dehydratase large subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2M7_9SPHN
isopropylmalate isomerase large subunit
cn_combo_scaffold_1879_12
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9013..10317)
DNA (1305bp) protein (435aa)
Beta-lactamase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDH3_9SPHN
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AJA10342.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergens
cn_combo_scaffold_1879_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10301..10957)
DNA (657bp) protein (219aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.5)
3-oxoacid CoA-transferase subunit B n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2M3_9SPHN
3-oxoacid CoA-transferase subunit B {ECO:0000313|EMBL:ENY81782.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sp
cn_combo_scaffold_1879_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10957..11853)
DNA (897bp) protein (299aa)
5'-nucleotidase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEA2_9SPHN
5'-nucleotidase {ECO:0000313|EMBL:ENY81781.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;
5'-nucleotidase
cn_combo_scaffold_1879_15
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11853..12575)
DNA (723bp) protein (241aa)
3-oxoacid CoA-transferase, subunit A {ECO:0000313|EMBL:ABF53832.1}; EC=2.8.3.5 {ECO:0000313|EMBL:ABF53832.1};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sp
3-oxoacid CoA-transferase, subunit A n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GR90_SPHAL
3-oxoacid CoA-transferase subunit A
cn_combo_scaffold_1879_16
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12664..13566
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU22_9SPHN
LysR family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
LysR family transcriptional regulator
cn_combo_scaffold_1879_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13624..14436
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDG9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81778.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_1879_18
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14669..15319)
DNA (651bp) protein (217aa)
Epoxide hydrolase domain-containing phosphatase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2M0_9SPHN
Epoxide hydrolase domain-containing phosphatase {ECO:0000313|EMBL:ENY81777.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;
epoxide hydrolase domain-containing phosphatase
cn_combo_scaffold_1879_19
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15553..16656)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTJ5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB58851.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_1879_20
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16710..17093
DNA (384bp) protein (128aa)
Uncharacterized protein n=6 Tax=Rhizobium meliloti RepID=F6E7I5_SINMK
Uncharacterized protein {ECO:0000313|EMBL:KGB58850.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_1879_21
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17264..17947)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU18_9SPHN
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_1879_22
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17965..18897)
DNA (933bp) protein (311aa)
Gluconolactonase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDG5_9SPHN
Gluconolactonase {ECO:0000313|EMBL:KGB58848.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC36
putative gluconolactonase precursor
cn_combo_scaffold_1879_23
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18944..19543
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2L5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB58847.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_1879_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19704..21146
DNA (1443bp) protein (481aa)
Succinate-semialdehyde dehydrogenase (NAD(P)+) n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WE94_9SPHN
Succinate-semialdehyde dehydrogenase (NAD(P)+) {ECO:0000313|EMBL:ENY81771.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;"
succinate-semialdehyde dehydrogenase (NAD(P)+)
cn_combo_scaffold_1879_25
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21180..21947)
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTJ0_9SPHN
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ENY81770.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source
short-chain dehydrogenase/reductase SDR
cn_combo_scaffold_1879_26
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21944..22315)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU14_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA10329.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_1879_27
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22405..22908
DNA (504bp) protein (168aa)
N-acetyltransferase GCN5 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDG0_9SPHN
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:KGB54927.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphin
N-acetyltransferase GCN5
cn_combo_scaffold_1879_28
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22974..23684
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2J9_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA10327.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_1879_29
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23684..24274
DNA (591bp) protein (197aa)
NUDIX hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDE9_9SPHN
NUDIX hydrolase {ECO:0000313|EMBL:ENY81753.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;
NUDIX hydrolase
cn_combo_scaffold_1879_30
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24271..25482
DNA (1212bp) protein (404aa)
Polynucleotide adenylyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU03_9SPHN
Polynucleotide adenylyltransferase region {ECO:0000313|EMBL:KGB58840.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" sour
polynucleotide adenylyltransferase
Displaying items 1-30 of 33 in total

View Taxonomy