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cn_combo_scaffold_2000

Alias: SPHP32_35

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2000_1
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..634)
DNA (633bp) protein (211aa)
Phage integrase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ30_SPHAL
phage integrase
Phage integrase {ECO:0000313|EMBL:ABF54242.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis
cn_combo_scaffold_2000_2
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1055..1651)
DNA (597bp) protein (199aa)
Putative CDF-family cation efflux system protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBQ8_9SPHN
cation efflux family protein
Cation efflux family protein {ECO:0000313|EMBL:AJA11389.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
cn_combo_scaffold_2000_3
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1769..4930)
DNA (3162bp) protein (1054aa)
Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UR08_9SPHN
AcrB/AcrD/AcrF family protein; K15726 cobalt-zinc-cadmium resistance protein CzcA Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
helA; Protein HelA
cn_combo_scaffold_2000_4
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4948..6213)
DNA (1266bp) protein (422aa)
Cation efflux system protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URE7_9SPHN
cation efflux system protein
Cation efflux system protein {ECO:0000313|EMBL:AJA11391.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
cn_combo_scaffold_2000_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6210..7445)
DNA (1236bp) protein (412aa)
Outer membrane efflux protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAY4_9SPHN
metal ion efflux outer membrane factor protein family
Outer membrane efflux protein {ECO:0000313|EMBL:ENY80908.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingop
cn_combo_scaffold_2000_6
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7510..7845)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W076_9SPHN
Putative secreted protein
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
cn_combo_scaffold_2000_7
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7895..8299)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBQ4_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA11394.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_2000_8
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8715..9077
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UR02_9SPHN
Putative secreted protein
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
cn_combo_scaffold_2000_9
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9143..10450
DNA (1308bp) protein (436aa)
Outer membrane efflux protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URE4_9SPHN
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AJA11396.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingop
cn_combo_scaffold_2000_10
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10560..11729
DNA (1170bp) protein (390aa)
Secretion protein HlyD n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAY1_9SPHN
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:AJA11397.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fr
cn_combo_scaffold_2000_11
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11733..14975
DNA (3243bp) protein (1081aa)
Heavy metal efflux pump CzcA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W072_9SPHN
nccA; Nickel-cobalt-cadmium resistance protein NccA
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:KGB59251.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopy
cn_combo_scaffold_2000_12
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14985..15329
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBP9_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGB59252.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
cn_combo_scaffold_2000_13
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15411..15881
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQZ8_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA11400.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_2000_14
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16072..18612
DNA (2541bp) protein (847aa)
Heavy metal translocating P-type ATPase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URE0_9SPHN
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AJA11401.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source
cn_combo_scaffold_2000_15
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18671..19156
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W067_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA11403.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_2000_16
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19153..19587
DNA (435bp) protein (145aa)
Disulfide bond formation protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBP5_9SPHN
Conserved Putative membrane protein
Conserved Putative membrane protein {ECO:0000313|EMBL:AJA11404.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sp
cn_combo_scaffold_2000_17
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19584..20228
DNA (645bp) protein (215aa)
DSBA oxidoreductase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQZ3_9SPHN
DSBA oxidoreductase Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
dsbA-like thioredoxin domain protein
cn_combo_scaffold_2000_18
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20419..20724
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URD5_9SPHN
hypothetical protein
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
cn_combo_scaffold_2000_19
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20793..21206
DNA (414bp) protein (138aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
cn_combo_scaffold_2000_20
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21233..21892)
DNA (660bp) protein (220aa)
Type 11 methyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAX4_9SPHN
methylase involved in ubiquinone/menaquinone biosynthesis
Type 11 methyltransferase {ECO:0000313|EMBL:KGB59260.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
cn_combo_scaffold_2000_21
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21940..22629)
DNA (690bp) protein (230aa)
AraC family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W064_9SPHN
hypothetical protein
AraC family transcriptional regulator {ECO:0000313|EMBL:KGB59261.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="
cn_combo_scaffold_2000_22
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22756..24702)
DNA (1947bp) protein (649aa)
Iron permease FTR1 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBN9_9SPHN
Iron permease FTR1 {ECO:0000313|EMBL:KGB59262.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC
iron permease FTR1
cn_combo_scaffold_2000_23
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24708..25349)
DNA (642bp) protein (214aa)
Cation efflux protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQY9_9SPHN
cation efflux protein
Cation efflux protein {ECO:0000313|EMBL:AJA11410.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fri
cn_combo_scaffold_2000_24
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25420..25833
DNA (414bp) protein (138aa)
MerR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URC9_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA11411.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_2000_25
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26089..26448)
DNA (360bp) protein (120aa)
Mercuric ion transport protein, MerT n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAX0_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA11413.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_2000_26
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26521..26922
DNA (402bp) protein (134aa)
Transcriptional regulator, MerR family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W059_9SPHN
transcriptional regulator, MerR family protein
Transcriptional regulator, MerR family protein {ECO:0000313|EMBL:AJA11414.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;"
cn_combo_scaffold_2000_27
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27006..27356)
DNA (351bp) protein (117aa)
Putative copper efflux system periplasmic protein CusF n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQC3_SPHAL
putative copper efflux system periplasmic protein CusF
putative copper efflux system periplasmic protein CusF Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Displaying 27 items

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