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cn_combo_scaffold_3105

Alias: SPHP32_47

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3105_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(286..528)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTL4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81795.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s
hypothetical protein
cn_combo_scaffold_3105_2
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(543..1658)
DNA (1116bp) protein (372aa)
alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
ald; Alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVP3_SPHAL
cn_combo_scaffold_3105_3
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1886..3238
DNA (1353bp) protein (451aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVP5_SPHAL
methyl-accepting chemotaxis sensory transducer
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_3105_4
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3289..3981
DNA (693bp) protein (231aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU38_9SPHN
short-chain dehydrogenase/reductase SDR Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
short-chain dehydrogenase/reductase SDR
cn_combo_scaffold_3105_5
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3971..4930
DNA (960bp) protein (320aa)
Beta-lactamase-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTL8_9SPHN
beta-lactamase-like protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
beta-lactamase-like protein
cn_combo_scaffold_3105_6
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4927..5898
DNA (972bp) protein (324aa)
ribosomal L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Ribosomal L11 methyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEC0_9SPHN
ribosomal L11 methyltransferase
cn_combo_scaffold_3105_7
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5936..6808)
DNA (873bp) protein (291aa)
Phenylalanine 4-monooxygenase {ECO:0000313|EMBL:KGB58307.1}; EC=1.14.16.1 {ECO:0000313|EMBL:KGB58307.1};; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphing
Phenylalanine 4-hydroxylase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVP8_SPHAL
phhA; phenylalanine 4-monooxygenase
cn_combo_scaffold_3105_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6983..7603)
DNA (621bp) protein (207aa)
modC; Molybdenum import ATP-binding protein ModC (EC:3.6.3.29)
ABC transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDJ0_9SPHN
ABC transporter {ECO:0000313|EMBL:ENY81803.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;
cn_combo_scaffold_3105_9
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7593..8288)
DNA (696bp) protein (232aa)
Molybdate ABC transporter permease n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU43_9SPHN
Molybdate ABC transporter, permease protein {ECO:0000313|EMBL:KGB54886.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" so
molybdate ABC transporter permease
cn_combo_scaffold_3105_10
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8288..9052)
DNA (765bp) protein (255aa)
Molybdenum ABC transporter periplasmic molybdate-binding protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTM2_9SPHN
Molybdenum ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:KGB54885.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace
molybdenum ABC transporter periplasmic molybdate-binding protein
cn_combo_scaffold_3105_11
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9071..9721)
DNA (651bp) protein (217aa)
Cyclic nucleotide-binding protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEC5_9SPHN
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:KGB58311.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphi
cyclic nucleotide-binding protein
cn_combo_scaffold_3105_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9782..10945)
DNA (1164bp) protein (388aa)
sterol desaturase (EC:1.14.21.6)
Sterol desaturase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WED0_9SPHN
Sterol desaturase {ECO:0000313|EMBL:ENY81811.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1
cn_combo_scaffold_3105_13
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11057..13222)
DNA (2166bp) protein (722aa)
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; TaxID=317655 species="Bacteria
DNA ligase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=DNLJ_SPHAL
NAD-dependent DNA ligase
cn_combo_scaffold_3105_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13219..13617)
DNA (399bp) protein (133aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTM8_9SPHN
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:ENY81815.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="
hypothetical protein
cn_combo_scaffold_3105_15
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13614..14351)
DNA (738bp) protein (246aa)
GCN5-related N-acetyltransferase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVQ4_SPHAL
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABF52268.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphing
cn_combo_scaffold_3105_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14348..16027)
DNA (1680bp) protein (560aa)
DNA repair protein RecN n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2Q7_9SPHN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
DNA repair protein RecN
cn_combo_scaffold_3105_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16300..17094)
DNA (795bp) protein (265aa)
Outer membrane protein assembly factor BamD n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDK8_9SPHN
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
DNA uptake lipoprotein
cn_combo_scaffold_3105_18
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17150..17854)
DNA (705bp) protein (235aa)
Peptidyl-prolyl cis-trans isomerase, cyclophilin type n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVQ7_SPHAL
Peptidyl-prolyl cis-trans isomerase, cyclophilin type {ECO:0000313|EMBL:KGB58321.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingop
cyclophilin type peptidyl-prolyl cis-trans isomerase
cn_combo_scaffold_3105_19
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18032..18244)
DNA (213bp) protein (71aa)
integrase n=1 Tax=Sphingomonas elodea RepID=UPI0002631A91
Transposase {ECO:0000313|EMBL:ESX08944.1}; Flags: Fragment;; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
Integrase catalytic subunit
cn_combo_scaffold_3105_20
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18454..19560
DNA (1107bp) protein (369aa)
transposase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003139BC3
Transposase
Transposase {ECO:0000313|EMBL:AHE55989.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens
Displaying 20 items

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