ggKbase home page

cn_combo_scaffold_5294

Alias: SPHP32_61

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5294_1
unknown

Not on your lists

comp(2..76)
DNA (75bp) protein (25aa)

This feature has no annotations

cn_combo_scaffold_5294_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(361..1113)
DNA (753bp) protein (251aa)
ABC transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URA2_9SPHN
ABC transporter {ECO:0000313|EMBL:ENY80859.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;
ABC transporter
cn_combo_scaffold_5294_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1110..2354)
DNA (1245bp) protein (415aa)
Putative cystathionine beta-lyase (EC:4.4.1.8)
Cystathionine beta-lyase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQW5_9SPHN
Cystathionine beta-lyase {ECO:0000313|EMBL:ENY80860.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis
cn_combo_scaffold_5294_4
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2347..4536)
DNA (2190bp) protein (730aa)
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQF0_SPHAL
amino acid ABC transporter permease
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_5294_5
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4533..5411)
DNA (879bp) protein (293aa)
Extracellular solute-binding protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W041_9SPHN
extracellular solute-binding protein
Extracellular solute-binding protein {ECO:0000313|EMBL:AJA11443.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="S
cn_combo_scaffold_5294_6
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5662..6567
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family n=2 Tax=Sphingopyxis RepID=Q1GQE8_SPHAL
LysR family transcriptional regulator
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_5294_7
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6605..9076)
DNA (2472bp) protein (824aa)
TonB-dependent receptor, plug n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URA7_9SPHN
TonB-dependent receptor, plug {ECO:0000313|EMBL:KGB59293.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingop
TonB-dependent receptor, plug
cn_combo_scaffold_5294_8
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9263..9784)
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Sphingopyxis RepID=Q1GQE5_SPHAL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA11438.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis f
cn_combo_scaffold_5294_9
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9786..10229)
DNA (444bp) protein (148aa)
Uncharacterized protein n=2 Tax=Sphingopyxis RepID=Q1GQE4_SPHAL
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
cn_combo_scaffold_5294_10

Not on your lists

comp(10268..11164)
DNA (897bp) protein (299aa)
Copper resistance B n=2 Tax=Sphingopyxis RepID=Q1GQE3_SPHAL
copper resistance B
Marine sediment metagenome DNA, contig: S12H4_S01968 {ECO:0000313|EMBL:GAI90183.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Displaying 10 items

View Taxonomy