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cn_combo_scaffold_12743

Alias: SPHP32_171

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_12743_1
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..112)
DNA (111bp) protein (37aa)
ATPase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GWP7_9SPHN
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:KGB56433.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source
cn_combo_scaffold_12743_2
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(378..965)
DNA (588bp) protein (196aa)
LuxR family transcriptional regulator; K00936 [EC:2.7.3.-] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
LuxR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPB3_9SPHN
LuxR family transcriptional regulator
cn_combo_scaffold_12743_3
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1002..2111
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU04_9SPHN
hypothetical protein; K06955 Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
cn_combo_scaffold_12743_4
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2108..3670
DNA (1563bp) protein (521aa)
crtQ; zeta-carotene desaturase (EC:1.14.99.-); K10027 phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
crtQ; zeta-carotene desaturase (EC:1.14.99.-)
Phytoene dehydrogenase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MU45_9SPHN
cn_combo_scaffold_12743_5
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3929..5302
DNA (1374bp) protein (458aa)
deoxyribodipyrimidine photolyase; K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Deoxyribodipyrimidine photo-lyase type I n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GUF7_SPHAL
deoxyribodipyrimidine photolyase
cn_combo_scaffold_12743_6
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5321..5521)
DNA (201bp) protein (67aa)
UPI0003D01F87 related cluster n=1 Tax=unknown RepID=UPI0003D01F87
antibiotic biosynthesis monooxygenase Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
cn_combo_scaffold_12743_7
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5656..6078)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VV64_9SPHN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hypothetical protein
cn_combo_scaffold_12743_8
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6297..6851
DNA (555bp) protein (185aa)
Beta-Ig-H3/fasciclin n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GUF8_SPHAL
beta-Ig-H3/fasciclin Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
beta-Ig-H3/fasciclin
cn_combo_scaffold_12743_9
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6912..7970)
DNA (1059bp) protein (353aa)
ferrochelatase; K01772 ferrochelatase [EC:4.99.1.1] Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
hemH; Ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4C2_9SPHN
cn_combo_scaffold_12743_10
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8353..8700)
DNA (348bp) protein (116aa)
Integrase, catalytic region n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJ89_9SPHN
transposase
Integrase, catalytic region {ECO:0000313|EMBL:EHJ58675.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
Displaying 10 items

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