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cn_combo_scaffold_23_45

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(59110..59736)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system outer membrane lipoprotein NodT n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ61_THIDA similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 206.0
  • Bit_score: 283
  • Evalue 1.60e-73
RND efflux system outer membrane lipoprotein NodT Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 204.0
  • Bit_score: 296
  • Evalue 2.50e-77
RND efflux system outer membrane lipoprotein NodT similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 206.0
  • Bit_score: 283
  • Evalue 4.40e-74

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Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGCCCGATTTCAGGCTGGCCGAATTCAGCCTGCCCAACGATCTGCCGCTGGTGCTGCCGTCGGCACTGGTGCACCAGCGCCCCGACATCCAGGCGGCCGAGGCCCTGCTGCACGCAGCCAACGCCGACTACGGCGTGGCGGTGGCGAGGCTCTACCCGCAGATCGAGCTCAGCGCCAGCCTGGGCTCGCAGGCACTGACCACCGGGGCACTGTTCGGAGGCGCGGCGGGTGTGTGGAGCGTGCTGGCGCAACTGACCCAGCCGCTGTTCGATGCCGGGCTGCCGGCCGAGAAGCGGGCGTCGCTGGCGACACTCGACGCCGCGGCGGCCCACTACCAGGGCGTCGTGCTCGACGCCCTGCGCGACGTCGCCGATGCACTGCGTGCGCTCGATCACGATGCCCAGGCACTGGCCGCGCTGGCCGCTGCCGACGCGGCGGCGCACACTTCTCTGGCCTCCATCGAGCGCCAGTACGCGCTCGGCAGCGCCAGCTACGTCCAGGGGTTGCTGGCGCGGCAGCAGGCGCAGCGCCAGGCGATGAGCCTGATCACCGCGCAGGCGCAGCGGCTCGCCGACAGCGCCGCGCTCTACCAGGCCCTGGGAGGCGGGACCGCCGACGACCGCTGA
PROTEIN sequence
Length: 209
MPDFRLAEFSLPNDLPLVLPSALVHQRPDIQAAEALLHAANADYGVAVARLYPQIELSASLGSQALTTGALFGGAAGVWSVLAQLTQPLFDAGLPAEKRASLATLDAAAAHYQGVVLDALRDVADALRALDHDAQALAALAAADAAAHTSLASIERQYALGSASYVQGLLARQQAQRQAMSLITAQAQRLADSAALYQALGGGTADDR*