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cn_combo_scaffold_486_18

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(21532..22749)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000311E8CB similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 405.0
  • Bit_score: 584
  • Evalue 6.40e-164
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EIK89038.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 407.0
  • Bit_score: 584
  • Evalue 1.50e-163
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 404.0
  • Bit_score: 570
  • Evalue 3.50e-160

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGAAACGCACCATGCTCAGCACGCTGATCGCCGGCTTCGGCCTGGCCCTGACCGGCGGCGCCCAGGCCGCGATCAGCGACGGCGTCGTCAGGATCGGGGTGCTCAACGACATGAGCGGCCCCTACGCCGACCTCGCCGGCCCGGGCTCCGTCGTCGCCGCGAAGATGGCGGTCGAGGACTACGTCAAGCAGACCGGCTCCAAGCTGAAGATCGAGATCGTCTCGGCCGACCACCAGAACAAGCCGGACGTGGGCTCCAGCATCACGCGCAAGTGGATCGACTCCGACGGCGTCGACATGATCCTCGACGTGCCCACCTCCTCGGTCGCGCTGGCGGTCGCCCAGGTCGTGAAGGAGAAGAACAAGCTGATGCTCAACTCGACCGGCGGCAGCTCCGACCTCACCGGCAAGGCCTGCACCCCCAACACCGTGCACTGGACCTACGACACCTGGATGCTCGCGCACGGCACCGGCTCGGCGGTCGTCAAGAACGGCGGCGACACCTGGTTCTTCATCACCGCCGACTACGCCTTCGGCCACGCGCTGGAGAAGGACACCGCCGACGTCGTCAAGGCCTCGGGCGGCAAGGTGCTGGGTGCCGTTCGCGTGCCGCTGGGCACGACCGACTTCTCCTCCTTCCTGCTGCAGGCGCAGTCGTCCAAGGCGAAGATCGTCGGCCTGGCCAACGCCGGCAACGACACCATCAACTCGATCAAGCAGGCGGCCGAGTTCGGCATCGTCGCCGGCGGCCAGAAGATGGCCGGCCTCCTCGTCTTCCTCTCCGACATCCACGGCCTGGGCCTGAAGACTGCGCAGGGGCTGCAGGTGACGACGACCTTCTACTGGGACATGAACGACGCCACGCGCGCCTGGTCCAAGCGTTTTGGCGCGCTGCACGGCAACCGCATGCCCACCATGGTGCAGGCCGGCGTCTATGCGGGCCTGCTGCACTACCTGAAGGCGGTCGACGCGTTGCAGGAAGACGCCGACGGCGCCAAGGTCGTGGTCAAGATGAAGGAGATGCCCACCGACGACCCGCTGTTCGGCAAGGGCAGCATTCGCGTCGACGGCCGCAAGATCCACCCGGCCTACCTGGTGGAAGTGAAGAAGCCGGCCGAGTCGAAGTACGCCTACGACTACTACAAGGTGCTGCAGACCATCCCGGCCGACCAGGCCTTCCGCCCGCTGAAGGACGGCAACTGCCCGCTCGTCAAGTAA
PROTEIN sequence
Length: 406
MKRTMLSTLIAGFGLALTGGAQAAISDGVVRIGVLNDMSGPYADLAGPGSVVAAKMAVEDYVKQTGSKLKIEIVSADHQNKPDVGSSITRKWIDSDGVDMILDVPTSSVALAVAQVVKEKNKLMLNSTGGSSDLTGKACTPNTVHWTYDTWMLAHGTGSAVVKNGGDTWFFITADYAFGHALEKDTADVVKASGGKVLGAVRVPLGTTDFSSFLLQAQSSKAKIVGLANAGNDTINSIKQAAEFGIVAGGQKMAGLLVFLSDIHGLGLKTAQGLQVTTTFYWDMNDATRAWSKRFGALHGNRMPTMVQAGVYAGLLHYLKAVDALQEDADGAKVVVKMKEMPTDDPLFGKGSIRVDGRKIHPAYLVEVKKPAESKYAYDYYKVLQTIPADQAFRPLKDGNCPLVK*