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cn_combo_scaffold_1447_34

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(30339..30650)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX54_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 103.0
  • Bit_score: 193
  • Evalue 8.10e-47
rplU; 50S ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 103.0
  • Bit_score: 193
  • Evalue 2.30e-47
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="R similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 103.0
  • Bit_score: 193
  • Evalue 1.10e-46

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Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGTACGCGGTCATAAAAACCGGTGGCAAGCAATACAAGGTTGCTGCCGGCGAAAAGATCAAGGTAGAACAGATTGCTGCGGACGTGGGCCAGGAGATCGTGATCGACCAGGTGCTCGCCGTTGGCAACGGCGCCGAGCTTCAGGTGGGCACGCCCTGGGTCGCGGGCGCCAACGTCAAGGCCACCGTGCTCGCGCACGGCAAGCATGACAAGGTGCGCATCTTCAAGATGCGCCGCCGCAAGCACTACCAGAGGCACGGCGGTCACCGCCAGACCTATACCGAGTTGCAGATCGCCTCGGTCAACGCCTGA
PROTEIN sequence
Length: 104
MYAVIKTGGKQYKVAAGEKIKVEQIAADVGQEIVIDQVLAVGNGAELQVGTPWVAGANVKATVLAHGKHDKVRIFKMRRRKHYQRHGGHRQTYTELQIASVNA*