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cn_combo_scaffold_2126_32

Organism: CN-SCN_Rubrivivax_131x

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(30725..32050)

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane protein, TolC family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5J2_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 444.0
  • Bit_score: 472
  • Evalue 3.90e-130
TolC family type I secretion outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 444.0
  • Bit_score: 472
  • Evalue 1.10e-130
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:ACB34704.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.; similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 444.0
  • Bit_score: 472
  • Evalue 5.40e-130

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
ATGCCCGCACTGCGCCCTGCCCTGCGTCGTACCAGCCTTGCCGCGGCCGCCGTGCTGGTCGCCTGCAGCGTCCAGGCGCAGAGCCTGAAGGACTTGTACGAGGCGGCGCGCGCCTATGACGCGACCTACTTGTCGGCGCGCGCGCAGGCGCAGTCGGCCGAACCGCGCGCCGCTGCGGCCGAGGCGCTGGCGCGGCCGACGCTGGCCTTGACCGCGGCCGCGAGCACGGCGCGCGTGGATCCGCAGGACTTCCCCGCCGGCGACAGCAACGCCGTCAACGCGGCGCTTGCCGCGCGCTATCCGATCATCAACCGCGTCAACGACGCCTCGATCGCGCAGGCGCGCAGCGCGCTCGACGCCGCCAACGCCGATCTCGCGCTGGCCGAGCAGGACTTGATCGTGCGTGTGGCGCAGGCCTACTTCGACGTGCTCGCGGCGCAGGACACGCTGGCCACCGTGCAGGCCAACAAGACCGGCATCACCGAGCAGCTCGCTTCGGCCAGGCGCAACTTCGAGGTCGGCACGGCAACGATCACGGACACGCGCGAGGCGCAGGCCAAGTTCGACAAGGCGGTGGCCGACGAGATCGCCGCCGAGAACGCTCTGCGCAGCACGCACATCGCGCTGGACCAGCTGGTCGGACGTACCGGCGTCCAGCCGCACGCGCTCGTGCGGCCGGTGGTGCTGCCGCTGCTCGCGCCTACCGACGTCGAGAGCTGGGTGACCCGCGCCGACGGCGCACATCCCGGCCTGAGCCGCGCGCGCGTCGGCCTGGATATCGCCCGGCTCGAAACCGAGAAGGCGCGCGCCGCCGAGAAGTTCACGCTCGACGCCGTCGGCTCGGTGGGCGCCGTGCATGCCAGCGGGCGCTACCCCACGGGCCTGGGCGGCCGCAGCAGCACCGCCAGCATCGGCCTGCAGTTCAGCCAGCCGCTCTACACCGGCGGCCTGACGGAAAACCGCATCCGCGAGACCCTGCTGCTCGAGGAGAAGGCGCGCCAGGACCTGGACGGCGTGCGCCGCGCGATCGCGCAGAACACGCGCGTCGCCTTTCTCGGCGTGCAGTCCGGCCACGCGCAGGTGAAGGCGCTGGAAGCGGCCGAATCCTCGGCCAAGCTGGCCCTGGAAGCCACGCAGCTCGGCTACCGCGTCGGCGTGCGCGTCAACCTCGACGTGCTCAACGCCCAGACGCAGCTCTTCCAGACCGAGCGCGACCTCGCCCGCGCCCGCTACGACGTGCTGCTGGGCAGCCTGCGCCTGCGCCAGGCCTCGGGCCAGCTCCAGGGCGGCGATCTCGACGCCATCAACGCGCTGCTGGCACGCTGA
PROTEIN sequence
Length: 442
MPALRPALRRTSLAAAAVLVACSVQAQSLKDLYEAARAYDATYLSARAQAQSAEPRAAAAEALARPTLALTAAASTARVDPQDFPAGDSNAVNAALAARYPIINRVNDASIAQARSALDAANADLALAEQDLIVRVAQAYFDVLAAQDTLATVQANKTGITEQLASARRNFEVGTATITDTREAQAKFDKAVADEIAAENALRSTHIALDQLVGRTGVQPHALVRPVVLPLLAPTDVESWVTRADGAHPGLSRARVGLDIARLETEKARAAEKFTLDAVGSVGAVHASGRYPTGLGGRSSTASIGLQFSQPLYTGGLTENRIRETLLLEEKARQDLDGVRRAIAQNTRVAFLGVQSGHAQVKALEAAESSAKLALEATQLGYRVGVRVNLDVLNAQTQLFQTERDLARARYDVLLGSLRLRQASGQLQGGDLDAINALLAR*