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cn_combo_scaffold_2193

Alias: THIO1207_3

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2193_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..829
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003714FF6
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:AAZ97409.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteo
cn_combo_scaffold_2193_2
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

911..2635
DNA (1725bp) protein (575aa)
DNA polymerase III n=1 Tax=Thiobacillus thioparus RepID=UPI00037E21A4
DNA polymerase X; K02347 DNA polymerase (family X) Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
DNA polymerase X rbh
cn_combo_scaffold_2193_3
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2638..3630
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003675894
capsule synthesis protein, CapA
Capsule synthesis protein, CapA {ECO:0000313|EMBL:ADE12379.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans
cn_combo_scaffold_2193_4
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3627..4307
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036CEED4
putative cytoplasmic protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
cytoplasmic protein
cn_combo_scaffold_2193_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4309..4860)
DNA (552bp) protein (184aa)
30S ribosomal protein S30 n=1 Tax=Thiobacillus thioparus RepID=UPI00037DDB8B
30S ribosomal protein S30P / sigma 54 modulation protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
30S ribosomal protein S30
cn_combo_scaffold_2193_6
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4897..5346)
DNA (450bp) protein (150aa)
Putative uncharacterized protein id=1378558 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
signal-transduction protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
signal-transduction protein
cn_combo_scaffold_2193_7
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5422..5979)
DNA (558bp) protein (186aa)
Chaperone protein DnaJ n=1 Tax=Azoarcus sp. KH32C RepID=H0Q380_9RHOO
heat shock protein DnaJ-like protein; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
dnaJ; chaperone protein
cn_combo_scaffold_2193_8
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6032..6127)
DNA (96bp) protein (32aa)
heat shock protein 70; K04043 molecular chaperone DnaK Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
cn_combo_scaffold_2193_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6196..7014)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003765E80
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_2193_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6995..9424)
DNA (2430bp) protein (810aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037BE4C1
ATP-dependent protease Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ATP-dependent protease rbh
cn_combo_scaffold_2193_11
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9438..10784)
DNA (1347bp) protein (449aa)
nicotinate phosphoribosyltransferase (EC:2.4.2.11) Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003777EB8
cn_combo_scaffold_2193_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10781..11395)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000372867F
isochorismatase hydrolase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
pyrazinamidase/nicotinamidase
cn_combo_scaffold_2193_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11429..11599)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364B5AC
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_2193_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11692..12678
DNA (987bp) protein (329aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1) rbh
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037DF960
cn_combo_scaffold_2193_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12686..13738)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036341CD
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_2193_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13890..14390
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A635F
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
cn_combo_scaffold_2193_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14418..14579
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364547A
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_2193_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14720..15616
DNA (897bp) protein (299aa)
putative diaminopimelate dehydrogenase (EC:1.4.1.16); K03340 diaminopimelate dehydrogenase [EC:1.4.1.16] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381B6F5
Diaminopimelate dehydrogenase
cn_combo_scaffold_2193_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15651..16145
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003607CE5
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_2193_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16206..16940
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000382A6BB
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_2193_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16937..18406
DNA (1470bp) protein (490aa)
glutathione synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00035FE5BB
glutathione synthase/ribosomal protein S6 modification protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
glutathione synthase/ribosomal protein S6 modification protein
cn_combo_scaffold_2193_22
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18406..19641
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000380201D
Glutamate--cysteine ligase {ECO:0000313|EMBL:GAO36841.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella s
hypothetical protein
cn_combo_scaffold_2193_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19646..20404
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003821302
N-formylglutamate amidohydrolase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
N-formylglutamate amidohydrolase
cn_combo_scaffold_2193_24
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20468..20866
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378C89A
TraR/DksA family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
TraR/DksA family transcriptional regulator
cn_combo_scaffold_2193_25
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20912..21217
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368ADCD
30S ribosomal protein S30P / sigma 54 modulation protein Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
30S ribosomal protein S30
cn_combo_scaffold_2193_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21244..22776
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003768DB3
hypothetical protein; K07028 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
cn_combo_scaffold_2193_27
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23091..23609
DNA (519bp) protein (173aa)
Putative diguanylate phosphodiesterase (EAL domain) with GAF sensor n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SEY0_THIDA
diguanylate phosphodiesterase
Putative diguanylate phosphodiesterase (EAL domain) with GAF sensor {ECO:0000313|EMBL:AAZ97014.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophila
cn_combo_scaffold_2193_28
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23710..24546)
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E948A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK58361.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acid
cn_combo_scaffold_2193_29
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24652..24912)
DNA (261bp) protein (87aa)
GntR family transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI0003687DDE
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AAZ97009.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus
cn_combo_scaffold_2193_30
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25158..26378
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003752D72
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
Displaying items 1-30 of 35 in total

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