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cn_combo_scaffold_2801

Alias: THIO1207_5

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2801_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..647)
DNA (645bp) protein (215aa)
cytochrome C oxidase subunit III n=1 Tax=Thiobacillus thioparus RepID=UPI00035EB899
cytochrome c oxidase cbb3-type subunit III; K00406 cytochrome c oxidase cbb3-type subunit III Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cytochrome c oxidase cbb3-type subunit III
cn_combo_scaffold_2801_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(644..829)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035EDFDF
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_2801_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(854..1600)
DNA (747bp) protein (249aa)
peptidase S41 n=1 Tax=Thiobacillus thioparus RepID=UPI000366DDED
cbb3-type cytochrome c oxidase subunit II; K00405 cytochrome c oxidase cbb3-type subunit II Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cbb3-type cytochrome c oxidase subunit II
cn_combo_scaffold_2801_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1620..3074)
DNA (1455bp) protein (485aa)
cbb3-type cytochrome c oxidase subunit I; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cytochrome oxidase subunit I n=1 Tax=Thiobacillus thioparus RepID=UPI000360046D
cbb3-type cytochrome c oxidase subunit I
cn_combo_scaffold_2801_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3194..3787)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364A64C
putative SCO1/SenC family protein; K07152 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCO1/SenC family protein
cn_combo_scaffold_2801_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3784..4248)
DNA (465bp) protein (155aa)
BadM/Rrf2 family transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Putative uncharacterized protein id=1308430 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
BadM/Rrf2 family transcriptional regulator
cn_combo_scaffold_2801_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4333..5229)
DNA (897bp) protein (299aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
protoheme IX farnesyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00036A9E83
protoheme IX farnesyltransferase
cn_combo_scaffold_2801_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5232..6215)
DNA (984bp) protein (328aa)
cytochrome C oxidase subunit I n=1 Tax=Thiobacillus thioparus RepID=UPI000376613A
putative cytochrome aa3 oxidase assembly protein; K02259 cytochrome c oxidase assembly protein subunit 15 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cytochrome aa3 oxidase assembly protein
cn_combo_scaffold_2801_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6225..6824)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037DB626
transmembrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transmembrane protein
cn_combo_scaffold_2801_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6817..7554)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003639752
SURF1 family protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SURF1 family protein
cn_combo_scaffold_2801_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7603..7803
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000379082B
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
cn_combo_scaffold_2801_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7904..8770)
DNA (867bp) protein (289aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
MFS transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003788960
cytochrome c oxidase subunit III
cn_combo_scaffold_2801_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8801..8998)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000381AF30
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
cn_combo_scaffold_2801_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8991..9545)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E22CE
cytochrome c oxidase assembly protein; K02258 cytochrome c oxidase assembly protein subunit 11 Tax=GWE1_Thiobacillus_62_9_curated
cytochrome C oxidase assembly protein
cn_combo_scaffold_2801_15
unknown

Not on your lists

comp(9549..9671)
DNA (123bp) protein (41aa)

This feature has no annotations

cn_combo_scaffold_2801_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9668..11248)
DNA (1581bp) protein (527aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=GWE1_Thiobacillus_62_9_curated
cytochrome c oxidase subunit I (EC:1.9.3.1)
cytochrome oxidase subunit I n=1 Tax=Thiobacillus thioparus RepID=UPI00037EC99B
cn_combo_scaffold_2801_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11272..12426)
DNA (1155bp) protein (385aa)
cytochrome c oxidase subunit II (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=GWE1_Thiobacillus_62_9_curated
cytochrome c oxidase subunit II (EC:1.9.3.1)
cytochrome B559 subunit alpha n=1 Tax=Thiobacillus thioparus RepID=UPI00035FD0DD
cn_combo_scaffold_2801_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12481..12999)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003732600
transmembrane protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transmembrane protein
cn_combo_scaffold_2801_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13096..13776)
DNA (681bp) protein (227aa)
dethiobiotin synthase (EC:6.3.3.3); K01935 dethiobiotin synthetase [EC:6.3.3.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
dethiobiotin synthase (EC:6.3.3.3)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003758049
cn_combo_scaffold_2801_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13773..14693)
DNA (921bp) protein (307aa)
biotin biosynthesis protein BioC; K02169 malonyl-CoA O-methyltransferase [EC:2.1.1.197] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
malonyl-CoA O-methyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003694920
biotin biosynthesis protein BioC
cn_combo_scaffold_2801_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14686..15432)
DNA (747bp) protein (249aa)
BioH; K02170 pimelyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036C0A1B
BioH
cn_combo_scaffold_2801_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15419..16579)
DNA (1161bp) protein (387aa)
8-amino-7-oxononanoate synthase (EC:2.3.1.47); K00652 8-amino-7-oxononanoate synthase [EC:2.3.1.47] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
8-amino-7-oxononanoate synthase (EC:2.3.1.47)
8-amino-7-oxononanoate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI000362F76E
cn_combo_scaffold_2801_23
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(16576..17529)
DNA (954bp) protein (318aa)
biotin synthase (EC:2.8.1.6); K01012 biotin synthetase [EC:2.8.1.6] Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
biotin synthase (EC:2.8.1.6)
biotin synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00036A1804
cn_combo_scaffold_2801_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17522..17980)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003768C43
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
cn_combo_scaffold_2801_25
unknown

Not on your lists

comp(18047..18817)
DNA (771bp) protein (257aa)

This feature has no annotations

cn_combo_scaffold_2801_26
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18765..19895)
DNA (1131bp) protein (377aa)
deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Thiobacillus thioparus RepID=UPI0003778481
deoxyguanosinetriphosphate triphosphohydrolase-like protein
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000255|HAMAP-Rule:MF_01212}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae
cn_combo_scaffold_2801_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19909..20052)
DNA (144bp) protein (48aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=GWE1_Thiobacillus_62_9_curated
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Thiobacillus thioparus RepID=UPI00036AA883
Displaying 27 items

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