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cn_combo_scaffold_3040

Alias: THIO1207_9

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3040_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..363
DNA (363bp) protein (121aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI000360B7EC
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_3040_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

539..1441
DNA (903bp) protein (301aa)
enoyl-CoA hydratase (EC:4.2.1.17)
enoyl-CoA hydratase n=1 Tax=Thiobacillus thioparus RepID=UPI00037231A1
Putative RpfF protein {ECO:0000313|EMBL:AAZ98625.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus den
cn_combo_scaffold_3040_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1421..3952)
DNA (2532bp) protein (844aa)
periplasmic sensor hybrid histidine kinase; K10715 two-component system, sensor histidine kinase RpfC [EC:2.7.13.3] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035EA9DB
periplasmic sensor hybrid histidine kinase
cn_combo_scaffold_3040_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3956..5113)
DNA (1158bp) protein (386aa)
divalent ion tolerance protein CutA n=1 Tax=Thiobacillus thioparus RepID=UPI000369ED49
metal dependent phosphohydrolase; K13815 two-component system, response regulator RpfG Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
metal dependent phosphohydrolase
cn_combo_scaffold_3040_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5172..5921
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A9A4B
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_3040_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5929..7911)
DNA (1983bp) protein (661aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036B267E
cn_combo_scaffold_3040_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7952..8980
DNA (1029bp) protein (343aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
phosphoribosylaminoimidazole synthetase n=1 Tax=Thiobacillus thioparus RepID=UPI00037A20E3
cn_combo_scaffold_3040_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8977..9609
DNA (633bp) protein (211aa)
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000380D4DB
cn_combo_scaffold_3040_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9612..10310
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A6EDB
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
cn_combo_scaffold_3040_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10723..11349
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A133F
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_3040_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11356..11823)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C4CFF
exported protein; K09005 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
exported protein
cn_combo_scaffold_3040_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11813..12949)
DNA (1137bp) protein (379aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21); K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] Tax=GWE1_Thiobacillus_62_9_curated
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
phosphoribosylaminoimidazole carboxylase n=1 Tax=Thiobacillus thioparus RepID=UPI0003693E5A
cn_combo_scaffold_3040_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12939..13436)
DNA (498bp) protein (166aa)
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thiobacillus thioparus RepID=UPI000375E044
cn_combo_scaffold_3040_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13528..13875
DNA (348bp) protein (116aa)
membrane protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003684AC5
hypothetical protein; K09922 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_3040_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13928..14260)
DNA (333bp) protein (111aa)
sulfur transfer protein TusE n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D0B97
DsrC -like protein Tax=GWE1_Thiobacillus_62_9_curated
DsrC -like protein
cn_combo_scaffold_3040_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14350..14724)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003808155
rhodanese-like protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rhodanese-like protein
cn_combo_scaffold_3040_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14732..16069)
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003672B71
chromate transporter; K07240 chromate transporter Tax=GWE1_Thiobacillus_62_9_curated
chromate transporter
cn_combo_scaffold_3040_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16190..17089)
DNA (900bp) protein (300aa)
LysR family transcriptional regulator n=1 Tax=Thiobacillus thioparus RepID=UPI00037AB16E
cbbR2; transcriptional regulator Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cbbR2; transcriptional regulator
cn_combo_scaffold_3040_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17229..18608
DNA (1380bp) protein (460aa)
ribulose bisphosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Ribulose 1,5-bisphosphate carboxylase, large subunit n=1 Tax=Leptothrix ochracea L12 RepID=I4Z5C5_9BURK
cbbM; ribulose 1,5-bisphosphate carboxylase, large subunit
Type II. Rose Kantor (6/30/14)
Displaying 19 items

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