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cn_combo_scaffold_3039

Alias: THIO1207_10

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3039_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..132)
DNA (132bp) protein (44aa)
MFS transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003777C93
putative transport transmembrane protein; K08218 MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
transport transmembrane protein
cn_combo_scaffold_3039_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129..908)
DNA (780bp) protein (260aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
exodeoxyribonuclease III n=1 Tax=Thiobacillus thioparus RepID=UPI00036B3EF3
cn_combo_scaffold_3039_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

936..1574
DNA (639bp) protein (213aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
orotate phosphoribosyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI0003806D0B
cn_combo_scaffold_3039_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1513..2166
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E4CAF
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_3039_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2215..3642)
DNA (1428bp) protein (476aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=GWE1_Thiobacillus_62_9_curated
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B id=1355126 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cn_combo_scaffold_3039_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3642..5099)
DNA (1458bp) protein (486aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=GWE1_Thiobacillus_62_9_curated
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
glutamyl-tRNA amidotransferase subunit A n=1 Tax=Thiobacillus thioparus RepID=UPI000378AF1C
cn_combo_scaffold_3039_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5103..5390)
DNA (288bp) protein (96aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=RIFOXYA1_FULL_Hydrogenophilal
aspartyl/glutamyl-tRNA amidotransferase subunit C (EC:6.3.5.-)
glutamyl-tRNA amidotransferase subunit C n=1 Tax=Thiobacillus thioparus RepID=UPI00037C27B8
cn_combo_scaffold_3039_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5493..6536
DNA (1044bp) protein (348aa)
rod shape-determining protein MreB n=1 Tax=Thiobacillus thioparus RepID=UPI0003655A13
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rod shape-determining protein MreB
cn_combo_scaffold_3039_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6565..7410
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003763A62
rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrog
cn_combo_scaffold_3039_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7407..7907
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BE39D
hypothetical protein; K03571 rod shape-determining protein MreD Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
cn_combo_scaffold_3039_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7915..9807
DNA (1893bp) protein (631aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05515 penicillin-binding protein 2 Tax=GWE1_Thiobacillus_62_9_curated
peptidoglycan glycosyltransferase (EC:2.4.1.129)
penicillin-binding protein 2 n=1 Tax=Thiobacillus thioparus RepID=UPI000368587B
cn_combo_scaffold_3039_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9794..10894
DNA (1101bp) protein (367aa)
cell wall shape-determining protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036C1F51
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rod shape-determining protein RodA
cn_combo_scaffold_3039_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10913..11731
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037C1F97
rare lipoprotein A; K03642 rare lipoprotein A Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
rare lipoprotein A
cn_combo_scaffold_3039_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11746..12861
DNA (1116bp) protein (372aa)
serine-type D-ala-D-ala carboxypeptidase (EC:3.4.16.4); K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
serine-type D-ala-D-ala carboxypeptidase (EC:3.4.16.4)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036336E8
cn_combo_scaffold_3039_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12858..13721
DNA (864bp) protein (288aa)
D-alanine transminase (EC:2.6.1.21); K00824 D-alanine transaminase [EC:2.6.1.21] Tax=GWE1_Thiobacillus_62_9_curated
D-alanine transminase (EC:2.6.1.21)
cytochrome C550 n=1 Tax=Thiobacillus thioparus RepID=UPI0003744C26
cn_combo_scaffold_3039_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13718..13984
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378009F
hypothetical protein; K09158 hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
cn_combo_scaffold_3039_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13984..14601
DNA (618bp) protein (206aa)
lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036F1920
lipoate-protein ligase B
cn_combo_scaffold_3039_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14651..15766
DNA (1116bp) protein (372aa)
anthranilate phosphoribosyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI000361F7BF
anthranilate phosphoribosyltransferase-like protein rbh
Anthranilate phosphoribosyltransferase-like protein {ECO:0000313|EMBL:AAZ96223.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacill
cn_combo_scaffold_3039_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15766..16074
DNA (309bp) protein (103aa)
dioxygenase n=1 Tax=Thiobacillus thioparus RepID=UPI00037AE749
putative dioxygenase ferredoxin subunit; K05710 dioxygenase ferredoxin subunit Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
dioxygenase ferredoxin subunit
cn_combo_scaffold_3039_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16183..17109
DNA (927bp) protein (309aa)
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=GWE1_Thiobacillus_62_9_curated
lipoyl synthase n=1 Tax=Thiobacillus thioparus RepID=UPI0003619D89
lipoyl synthase
cn_combo_scaffold_3039_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17124..18065)
DNA (942bp) protein (314aa)
Putative uncharacterized protein id=1316206 bin=GWE1_T_denit_62_9 species=Mycobacterium fortuitum genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
Hypothetical protein
cn_combo_scaffold_3039_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18129..18677)
DNA (549bp) protein (183aa)
nodulation protein NodJ n=1 Tax=Thiobacillus thioparus RepID=UPI0003738253
ABC-2 type transporter, NodJ; K09694 lipooligosaccharide transport system permease protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ABC-2 type transporter, NodJ
Displaying 22 items

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