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cn_combo_scaffold_3646

Alias: THIO1207_18

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3646_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1..912
DNA (912bp) protein (304aa)
L-alanine dehydrogenase (EC:1.4.1.1)
L-alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=GWE1_Thiobacillus_62_9_curated
alanine dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003728711
cn_combo_scaffold_3646_2
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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909..1916
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000370B854
predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:BAO81056.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacter
cn_combo_scaffold_3646_3

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1918..4173
DNA (2256bp) protein (752aa)
CRISPR-associated helicase Cas3 n=1 Tax=mine drainage metagenome RepID=E6PND0_9ZZZZ
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:CBH96432.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CRISPR-associated helicase Cas3
cn_combo_scaffold_3646_4

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4457..5122
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PND1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH96433.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
CRISPR-associated protein Cas5 family
cn_combo_scaffold_3646_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5119..6858
DNA (1740bp) protein (580aa)
CRISPR-associated protein Csd1 family n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEZ7_9GAMM
CRISPR-associated protein Csd1 family {ECO:0000313|EMBL:EIL98038.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
CRISPR-associated protein Csd1 family
cn_combo_scaffold_3646_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6855..7736
DNA (882bp) protein (294aa)
CRISPR-associated protein Csd2 family n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEZ6_9GAMM
CRISPR-associated protein Csd2 family {ECO:0000313|EMBL:EIL98037.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="R
CRISPR-associated protein Csd2 family
cn_combo_scaffold_3646_7
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7742..8035)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003756A05
plasmid stabilization system protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
cn_combo_scaffold_3646_8
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8025..8294)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037A8118
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
addiction module antitoxin
cn_combo_scaffold_3646_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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8342..8968
DNA (627bp) protein (209aa)
CRISPR-associated protein Cas4 n=1 Tax=Thiobacillus thioparus RepID=UPI00035E64F1
CRISPR-associated protein Cas4
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:ACX95668.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Haloth
cn_combo_scaffold_3646_10
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8970..10004
DNA (1035bp) protein (345aa)
CRISPR-associated protein Cas1 n=1 Tax=Thiobacillus thioparus RepID=UPI0003809A16
CRISPR-associated protein Cas1; K15342 CRISP-associated protein Cas1 Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
CRISPR-associated protein Cas1
cn_combo_scaffold_3646_11
unknown

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comp(9924..10343)
DNA (420bp) protein (140aa)

This feature has no annotations

cn_combo_scaffold_3646_12
unknown

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comp(10707..11054)
DNA (348bp) protein (116aa)

This feature has no annotations

cn_combo_scaffold_3646_13
unknown

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comp(11706..11912)
DNA (207bp) protein (69aa)

This feature has no annotations

cn_combo_scaffold_3646_14
unknown

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comp(11956..12057)
DNA (102bp) protein (34aa)

This feature has no annotations

cn_combo_scaffold_3646_15
unknown

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comp(12210..12485)
DNA (276bp) protein (92aa)

This feature has no annotations

cn_combo_scaffold_3646_16
unknown

Not on your lists

comp(12567..12845)
DNA (279bp) protein (93aa)

This feature has no annotations

cn_combo_scaffold_3646_17

Not on your lists

comp(13072..13707)
DNA (636bp) protein (212aa)
Uncharacterized protein {ECO:0000313|EMBL:CBH75422.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cn_combo_scaffold_3646_18
unknown

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comp(13790..13924)
DNA (135bp) protein (45aa)

This feature has no annotations

cn_combo_scaffold_3646_19
unknown

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comp(14006..14209)
DNA (204bp) protein (68aa)

This feature has no annotations

cn_combo_scaffold_3646_20

Not on your lists

comp(14432..14926)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PG35_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH75423.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cn_combo_scaffold_3646_21
unknown

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comp(15204..15698)
DNA (495bp) protein (165aa)

This feature has no annotations

cn_combo_scaffold_3646_22
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15695..16216)
DNA (522bp) protein (174aa)
hypothetical protein Rfer_3909 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=UPI000059AAB5
hypothetical protein
cn_combo_scaffold_3646_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16343..16726
DNA (384bp) protein (128aa)
cytochrome c oxidase cbb3-type subunit I; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
cytochrome oxidase subunit I n=1 Tax=Thiobacillus denitrificans RepID=UPI000372621E
cytochrome c oxidase cbb3-type subunit I
Displaying 23 items

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